RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CSH1P0DML2 217 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 CSH2P0DML3 217 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 PRKAR2AP13861 404 aaKnown RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 CD52P31358 61 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 MAGEA10P43363 369 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 C15orf59Q2T9L4 293 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 ZCWPW2Q504Y3 356 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 ARMCX4Q5H9R4 360 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 TERB1Q8NA31 727 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 RAD21L1Q9H4I0 556 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 ASB8Q9H765 288 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 AVENQ9NQS1 362 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-203ENST00000394872 TNFSF13BQ9Y275 285 aa10.55□□□□□ -0.72
COL4A6-203ENST00000394872 CCDC189A1A4V9 331 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 ZNF862O60290 1169 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 COX7A2P14406 83 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 FASP25445 335 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 TALDO1P37837 337 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 RPL21P46778 160 aaKnown RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 TAF13Q15543 124 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 ADRM1Q16186 407 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 TRIM16LQ309B1 348 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 CHADLQ6NUI6 762 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 CYB5D1Q6P9G0 228 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 WDR59Q6PJI9 974 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 DNAJC14Q6Y2X3 702 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 ATP13A3Q9H7F0 1226 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 SYNPO2Q9UMS6 1093 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 PXDNQ92626 1479 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 VAV1P15498 845 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 RXRGP48443 463 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 NAB1Q13506 487 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 FAM126BQ8IXS8 530 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 OR8H2Q8N162 312 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 TCP10LQ8TDR4 215 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 QRFPRQ96P65 431 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 SEMA4AQ9H3S1 761 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 IL1RAPL1Q9NZN1 696 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 ARHGAP28Q9P2N2 729 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 LIMD1Q9UGP4 676 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 MST1RQ04912 1400 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 IL1BP01584 269 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 CATP04040 527 aaKnown RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 RARAP10276 462 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 PECAM1P16284 738 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 NFKB1P19838 968 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 KDELR1P24390 212 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 PSMB4P28070 264 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 CHKAP35790 457 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 SCTRP47872 440 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 DLG4P78352 724 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 TRIT1Q9H3H1 467 aaKnown RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 ETNK2Q9NVF9 386 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 MEI4A8MW99 385 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 H3BN98 237 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 PEX1O43933 1283 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 TRUB2O95900 331 aaKnown RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 PAICSP22234 425 aaKnown RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 TLX1P31314 330 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 ABL2P42684 1182 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 DPYSL3Q14195 570 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 OASLQ15646 514 aaKnown RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 PSTKQ8IV42 348 aaKnown RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 C19orf18Q8NEA5 215 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 PROX1Q92786 737 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 COL26A1Q96A83 441 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 FAM163AQ96GL9 167 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 MRPS26Q9BYN8 205 aaKnown RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 BPIFA1Q9NP55 256 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 ST3GAL5Q9UNP4 418 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 COL5A2P05997 1499 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 LRRC14BA6NHZ5 514 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 APOC4-APOC2K7ER74 178 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 ACSL4O60488 711 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 APOC2P02655 101 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 IFNGR2P38484 337 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 PSEN1P49768 467 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 RRP1BQ14684 758 aaKnown RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 NPNTQ6UXI9 565 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 AGMOQ6ZNB7 445 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 RBM43Q6ZSC3 357 aaKnown RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 KRT77Q7Z794 578 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 RNFT2Q96EX2 444 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 TMEM79Q9BSE2 394 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 ZYG11BQ9C0D3 744 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 THAP1Q9NVV9 213 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 F8VP50 259 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 INPP4BO15327 924 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 KRT75O95678 551 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 GLI1P08151 1106 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 S100A3P33764 101 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 FLT3P36888 993 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 GSSP48637 474 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 RAB14P61106 215 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 NOGQ13253 232 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 KRR1Q13601 381 aaKnown RBP10.54□□□□□ -0.72
COL4A6-203ENST00000394872 DGKKQ5KSL6 1271 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 NEK10Q6ZWH5 1172 aa10.54□□□□□ -0.72
COL4A6-203ENST00000394872 VSIG10LQ86VR7 867 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms