RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ANKRD20A4Q4UJ75 823 aa18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 DCAF6Q58WW2 860 aa18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 OGFRL1Q5TC84 451 aaPredicted RBP18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 METTL21CQ5VZV1 264 aa18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 IQSEC1Q6DN90 963 aa18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 GATA5Q9BWX5 397 aaPredicted RBP18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 EIF2AQ9BY44 585 aaKnown RBP18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 SSX2IPQ9Y2D8 614 aa18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 INPP5FQ9Y2H2 1132 aa18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 COL1A2P08123 1366 aa18.71■□□□□ 0.59
PCDHA1-202ENST00000394633 TXNDC9O14530 226 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 DYNC1LI2O43237 492 aaPredicted RBP18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 TRIM13O60858 407 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 DAB1O75553 588 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 MPOP05164 745 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 TKTP29401 623 aaKnown RBP18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 HOXA11P31270 313 aaPredicted RBP18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 GNL1P36915 607 aaPredicted RBP18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 ADIGQ0VDE8 80 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 GRAMD1BQ3KR37 738 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 MAP3K21Q5TCX8 1036 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 UGT2A3Q6UWM9 527 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 SDCCAG8Q86SQ7 713 aaPredicted RBP18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 TMEM135Q86UB9 458 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 ACVR1CQ8NER5 493 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 URGCPQ8TCY9 931 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 MOCOSQ96EN8 888 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 TCF7L2Q9NQB0 619 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 ETAA1Q9NY74 926 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 VANGL2Q9ULK5 521 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 GOLGA8QA0A0J9YX86 632 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 GOLGA8OA6NCC3 632 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 KPNA7A9QM74 516 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 GOLGA8NF8WBI6 632 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 DCLK1O15075 740 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 C2P06681 752 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 PABPC4LP0CB38 370 aaKnown RBP18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 MPSTP25325 297 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 PTPN3P26045 913 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 PIK3R1P27986 724 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 SERPINB5P36952 375 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 FLT3LGP49771 235 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 FOLH1Q04609 750 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 PRKCZQ05513 592 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 BNIPLQ7Z465 357 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 TRIB2Q92519 343 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 BTBD9Q96Q07 612 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 NMRAL1Q9HBL8 299 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 KLHL8Q9P2G9 620 aaPredicted RBP18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 SLC4A7Q9Y6M7 1214 aa18.7■□□□□ 0.58
PCDHA1-202ENST00000394633 SPTLC1O15269 473 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 FBXO21O94952 628 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 AP2A1O95782 977 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 ALDH1A1P00352 501 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 CHRNGP07510 517 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 ALDH1A3P47895 512 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 NUDT2P50583 147 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 HSP90AA5PQ58FG0 334 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 PPM1LQ5SGD2 360 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 MARCH8Q5T0T0 291 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 TLK2Q86UE8 772 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 PIGZQ86VD9 579 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 ICA1LQ8NDH6 482 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 TRPV1Q8NER1 839 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 MFSD3Q96ES6 412 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 GCNAQ96QF7 691 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 NPY6RQ99463 290 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 WDR55Q9H6Y2 383 aaPredicted RBP18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 CASS4Q9NQ75 786 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 ACSS2Q9NR19 701 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 PSMD13Q9UNM6 376 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 DTNAQ9Y4J8 743 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 CAPN8A6NHC0 703 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 H3BRB1 525 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 EEF2KO00418 725 aaKnown RBP18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 AIM2O14862 343 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 HOXD8P13378 290 aaPredicted RBP18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 CHN2P52757 468 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 FCGRTP55899 365 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 DYNC1I2Q13409 638 aaKnown RBP18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 FRG1Q14331 258 aaKnown RBP18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 KIZQ2M2Z5 673 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 SNX32Q86XE0 403 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 PQLC1Q8N2U9 271 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 SLC7A14Q8TBB6 771 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 NT5C3BQ969T7 300 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 HAPLN3Q96S86 360 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 TUT1Q9H6E5 874 aaKnown RBP18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 BFARQ9NZS9 450 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 STK39Q9UEW8 545 aa18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 PRPF19Q9UMS4 504 aaKnown RBP18.69■□□□□ 0.58
PCDHA1-202ENST00000394633 NUP205Q92621 2012 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 A0A1B0GVG6 124 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 M0QYT0 321 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 NEMP1O14524 444 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 XPO1O14980 1071 aaKnown RBP18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 TRPA1O75762 1119 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 ETS2P15036 469 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 CCR10P46092 362 aa18.68■□□□□ 0.58
PCDHA1-202ENST00000394633 TRIM32Q13049 653 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms