RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 RXRGP48443 463 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 HARS2P49590 506 aaKnown RBP8.21□□□□□ -1.1
CASP4-201ENST00000393150 CLDN6P56747 220 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 ENPP2Q13822 863 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 STAT4Q14765 748 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 GEN1Q17RS7 908 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 ZSCAN23Q3MJ62 389 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 SNAP47Q5SQN1 464 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 PRAMEF14Q5SWL7 426 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 INO80CQ6PI98 192 aaPredicted RBP8.21□□□□□ -1.1
CASP4-201ENST00000393150 SHISA2Q6UWI4 295 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 LAYNQ6UX15 382 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 USP53Q70EK8 1073 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 RSRC2Q7L4I2 434 aaKnown RBP8.21□□□□□ -1.1
CASP4-201ENST00000393150 TRAPPC11Q7Z392 1133 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 PRPF39Q86UA1 669 aaKnown RBP8.21□□□□□ -1.1
CASP4-201ENST00000393150 WDR49Q8IV35 697 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 ARHGAP18Q8N392 663 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 OR2T34Q8NGX1 318 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 SNRNP27Q8WVK2 155 aaKnown RBP8.21□□□□□ -1.1
CASP4-201ENST00000393150 HIC2Q96JB3 615 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 VCPIP1Q96JH7 1222 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 KCNK16Q96T55 309 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 MRPL45Q9BRJ2 306 aaKnown RBP8.21□□□□□ -1.1
CASP4-201ENST00000393150 B3GNT5Q9BYG0 378 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 SEMA4CQ9C0C4 833 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 PCIF1Q9H4Z3 704 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 SIX4Q9UIU6 781 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 FBXO10Q9UK96 956 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 PCDHA5Q9Y5H7 936 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 CREBBPQ92793 2442 aa8.21□□□□□ -1.1
CASP4-201ENST00000393150 TYW5A2RUC4 315 aaKnown RBP8.2□□□□□ -1.1
CASP4-201ENST00000393150 H3BQV1 296 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 CBX4O00257 560 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 STX6O43752 255 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 TBX18O95935 607 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 PENKP01210 267 aaPredicted RBP8.2□□□□□ -1.1
CASP4-201ENST00000393150 ZDHHC11BP0C7U3 371 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 FAM200BP0CF97 657 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 PRKCHP24723 683 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 LONP1P36776 959 aaKnown RBP8.2□□□□□ -1.1
CASP4-201ENST00000393150 MAP3K7CLP57077 242 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 SLC8A3P57103 927 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 RPS14P62263 151 aaKnown RBP8.2□□□□□ -1.1
CASP4-201ENST00000393150 ST3GAL1Q11201 340 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 IL17AQ16552 155 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 MPPE1Q53F39 396 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 IGF2-ASQ6U949 168 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 DYMQ7RTS9 669 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 LIMS2Q7Z4I7 341 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 IQCHQ86VS3 1027 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 SFR1Q86XK3 245 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 ZSCAN31Q96LW9 406 aaPredicted RBP8.2□□□□□ -1.1
CASP4-201ENST00000393150 SLC6A18Q96N87 628 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 TMPRSS13Q9BYE2 586 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 USP29Q9HBJ7 922 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 IL37Q9NZH6 218 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 NCKIPSDQ9NZQ3 722 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 SCML2Q9UQR0 700 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 PAXBP1Q9Y5B6 917 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 MYO9AB2RTY4 2548 aa8.2□□□□□ -1.1
CASP4-201ENST00000393150 DOPEY2Q9Y3R5 2298 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 TBC1D3DA0A087WVF3 549 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 TBC1D3IA0A087WXS9 549 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 TBC1D3EA0A087X179 549 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 TBC1D3KA0A087X1G2 549 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 FAM92AA1XBS5 289 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 TBC1D3FA6NER0 549 aaPredicted RBP8.19□□□□□ -1.1
CASP4-201ENST00000393150 TBC1D3LB9A6J9 549 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 PIK3R2O00459 728 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 RNASEH2AO75792 299 aaKnown RBP8.19□□□□□ -1.1
CASP4-201ENST00000393150 HMBSP08397 361 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 DLDP09622 509 aaKnown RBP8.19□□□□□ -1.1
CASP4-201ENST00000393150 TBC1D3HP0C7X1 549 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 IDEP14735 1019 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 CORO1AP31146 461 aaKnown RBP8.19□□□□□ -1.1
CASP4-201ENST00000393150 NNMTP40261 264 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 CCR5P51681 352 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 GALCP54803 685 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 BIRC3Q13489 604 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 ZNF667Q5HYK9 610 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 KIAA1614Q5VZ46 1190 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 RNF219Q5W0B1 726 aaPredicted RBP8.19□□□□□ -1.1
CASP4-201ENST00000393150 TBC1D3GQ6DHY5 549 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 TBC1D3CQ6IPX1 549 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 NCEH1Q6PIU2 408 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.19□□□□□ -1.1
CASP4-201ENST00000393150 SLITRK4Q8IW52 837 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 TBC1D3Q8IZP1 549 aaPredicted RBP8.19□□□□□ -1.1
CASP4-201ENST00000393150 AHI1Q8N157 1196 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 MFSD2AQ8NA29 543 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 MAPK15Q8TD08 544 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 CCNL2Q96S94 520 aaPredicted RBP8.19□□□□□ -1.1
CASP4-201ENST00000393150 DUSP23Q9BVJ7 150 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 PABPC3Q9H361 631 aaKnown RBP8.19□□□□□ -1.1
CASP4-201ENST00000393150 NOP53Q9NZM5 478 aaKnown RBP8.19□□□□□ -1.1
CASP4-201ENST00000393150 TBC1D7Q9P0N9 293 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 SEPT10Q9P0V9 454 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 RASAL2Q9UJF2 1139 aa8.19□□□□□ -1.1
CASP4-201ENST00000393150 MUC22E2RYF6 1773 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms