RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 LPIN1Q14693 890 aa11.65□□□□□ -0.54
PDCD4-202ENST00000393104 LYSMD3Q7Z3D4 306 aa11.65□□□□□ -0.54
PDCD4-202ENST00000393104 EPHX4Q8IUS5 362 aa11.65□□□□□ -0.54
PDCD4-202ENST00000393104 DUS3LQ96G46 650 aaKnown RBP11.65□□□□□ -0.54
PDCD4-202ENST00000393104 MARK4Q96L34 752 aa11.65□□□□□ -0.54
PDCD4-202ENST00000393104 KCTD15Q96SI1 283 aaPredicted RBP11.65□□□□□ -0.54
PDCD4-202ENST00000393104 LGMNQ99538 433 aa11.65□□□□□ -0.54
PDCD4-202ENST00000393104 DOK1Q99704 481 aa11.65□□□□□ -0.54
PDCD4-202ENST00000393104 ZBTB26Q9HCK0 441 aa11.65□□□□□ -0.54
PDCD4-202ENST00000393104 OXSMQ9NWU1 459 aa11.65□□□□□ -0.54
PDCD4-202ENST00000393104 NXF1Q9UBU9 619 aaKnown RBP11.65□□□□□ -0.54
PDCD4-202ENST00000393104 CDH7Q9ULB5 785 aa11.65□□□□□ -0.54
PDCD4-202ENST00000393104 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.64□□□□□ -0.55
PDCD4-202ENST00000393104 SH3PXD2BA1X283 911 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 ZNF487B1APH4 448 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 PAPSS1O43252 624 aaPredicted RBP11.64□□□□□ -0.55
PDCD4-202ENST00000393104 ATE1O95260 518 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 FAM58BPP0C7Q3 252 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 PDGFRAP16234 1089 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 MLH1P40692 756 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 INCA1Q0VD86 236 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 DCTN2Q13561 401 aaKnown RBP11.64□□□□□ -0.55
PDCD4-202ENST00000393104 LRRC8BQ6P9F7 803 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 PTAR1Q7Z6K3 402 aaPredicted RBP11.64□□□□□ -0.55
PDCD4-202ENST00000393104 GALNT4Q8N4A0 578 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 CCDC185Q8N715 623 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 ZSCAN18Q8TBC5 510 aaPredicted RBP11.64□□□□□ -0.55
PDCD4-202ENST00000393104 SPATC1LQ9H0A9 340 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 PCDHAC1Q9H158 963 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 MROH8Q9H579 483 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 SARDHQ9UL12 918 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 PDCD11Q14690 1871 aaKnown RBP11.64□□□□□ -0.55
PDCD4-202ENST00000393104 RGSL1A5PLK6 1076 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 TMEM233B4DJY2 109 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 MAFO75444 373 aaPredicted RBP11.64□□□□□ -0.55
PDCD4-202ENST00000393104 CPA3P15088 417 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 HDCP19113 662 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 CYP2F1P24903 491 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 TMEM176AQ96HP8 235 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 MS4A4AQ96JQ5 239 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 CCT7Q99832 543 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 FERMT1Q9BQL6 677 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 ZNF670Q9BS34 389 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 SLC4A5Q9BY07 1137 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 APOL1O14791 398 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 OGTO15294 1046 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 CXCL8P10145 99 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 AP3M2P53677 418 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 MLLT10P55197 1068 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 CD300CQ08708 224 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 RFTN1Q14699 578 aaPredicted RBP11.64□□□□□ -0.55
PDCD4-202ENST00000393104 NRF1Q16656 503 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 BNIPLQ7Z465 357 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 SMYD1Q8NB12 490 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 AGR3Q8TD06 166 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 LRTOMTQ8WZ04 291 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 CEP41Q9BYV8 373 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 OSBPL2Q9H1P3 480 aa11.64□□□□□ -0.55
PDCD4-202ENST00000393104 COPG1Q9Y678 874 aaKnown RBP11.64□□□□□ -0.55
PDCD4-202ENST00000393104 THSD7BQ9C0I4 1608 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 HCRTO43612 131 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 HSPA1AP0DMV8 641 aaKnown RBP11.63□□□□□ -0.55
PDCD4-202ENST00000393104 HSPA1BP0DMV9 641 aaKnown RBP11.63□□□□□ -0.55
PDCD4-202ENST00000393104 BCAR1P56945 870 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 TFAMQ00059 246 aaKnown RBP11.63□□□□□ -0.55
PDCD4-202ENST00000393104 LRP8Q14114 963 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 MAP7Q14244 749 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 PDK2Q15119 407 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 TRIM67Q6ZTA4 783 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 PGAM4Q8N0Y7 254 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 PPP1R36Q96LQ0 422 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 CSPG4P5Q96PW8 444 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 KCNK16Q96T55 309 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 RBBP8Q99708 897 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 NPAS2Q99743 824 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 ADPGKQ9BRR6 497 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 ASNSD1Q9NWL6 643 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 RSL24D1Q9UHA3 163 aaKnown RBP11.63□□□□□ -0.55
PDCD4-202ENST00000393104 SFMBT1Q9UHJ3 866 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 TCRBV3S1A0A5B6 114 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 PRORSD1PA6NEY8 169 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 H0Y858 1186 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 H0YCG3 227 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 SOCS2O14508 198 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 ADAM23O75077 832 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 SERPINB7O75635 380 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 IL18RAPO95256 599 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 H6PDO95479 791 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 ZBED1O96006 694 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 CCDC130P13994 396 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 ACBD5Q5T8D3 534 aaPredicted RBP11.63□□□□□ -0.55
PDCD4-202ENST00000393104 NANOGP8Q6NSW7 305 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 ZNF554Q86TJ5 538 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 GPR180Q86V85 440 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 KDM1BQ8NB78 822 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 KYQ8NBH2 561 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 DEPTORQ8TB45 409 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 TCF7L2Q9NQB0 619 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 ANLNQ9NQW6 1124 aa11.63□□□□□ -0.55
PDCD4-202ENST00000393104 TLR9Q9NR96 1032 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms