RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ZNF106Q9H2Y7 1883 aaKnown RBP13.57□□□□□ -0.24
USP44-202ENST00000393091 WASH3PC4AMC7 463 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 MTSS1O43312 755 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 HOXA6P31267 233 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 HSPA9P38646 679 aaKnown RBP13.57□□□□□ -0.24
USP44-202ENST00000393091 CSKP41240 450 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 GNG11P61952 73 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 CBLBQ13191 982 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 CDH18Q13634 790 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 POLD3Q15054 466 aaPredicted RBP13.57□□□□□ -0.24
USP44-202ENST00000393091 ANO4Q32M45 955 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 PPP6R3Q5H9R7 873 aaPredicted RBP13.57□□□□□ -0.24
USP44-202ENST00000393091 TRMT11Q7Z4G4 463 aaKnown RBP13.57□□□□□ -0.24
USP44-202ENST00000393091 CCDC117Q8IWD4 279 aaPredicted RBP13.57□□□□□ -0.24
USP44-202ENST00000393091 HCAR2Q8TDS4 363 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 C2orf49Q9BVC5 232 aaPredicted RBP13.57□□□□□ -0.24
USP44-202ENST00000393091 HEBP1Q9NRV9 189 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 MFHAS1Q9Y4C4 1052 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 ANKRD36A6QL64 1941 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 MFSD11O43934 449 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 NSUN2Q08J23 767 aaKnown RBP eCLIP13.57□□□□□ -0.24
USP44-202ENST00000393091 PDK1Q15118 436 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 CCNG2Q16589 344 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 TRIM67Q6ZTA4 783 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 CREG2Q8IUH2 290 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 CARNMT1Q8N4J0 409 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 FRS2Q8WU20 508 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 IL12RB2Q99665 862 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 TARSL2A2RTX5 802 aaKnown RBP13.57□□□□□ -0.24
USP44-202ENST00000393091 GSRP00390 522 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 CES1P23141 567 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 ADCY2Q08462 1091 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 GRSF1Q12849 480 aaKnown RBP eCLIP13.57□□□□□ -0.24
USP44-202ENST00000393091 RNF219Q5W0B1 726 aaPredicted RBP13.57□□□□□ -0.24
USP44-202ENST00000393091 TXNDC11Q6PKC3 985 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 CCDC105Q8IYK2 499 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 RNF25Q96BH1 459 aaPredicted RBP13.57□□□□□ -0.24
USP44-202ENST00000393091 CALN1Q9BXU9 219 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 ELOVL2Q9NXB9 296 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 MUTYHQ9UIF7 546 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 PACSIN2Q9UNF0 486 aaPredicted RBP13.57□□□□□ -0.24
USP44-202ENST00000393091 ERVW-1Q9UQF0 538 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 ATP8A1Q9Y2Q0 1164 aa13.57□□□□□ -0.24
USP44-202ENST00000393091 MATN3O15232 486 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 DLDP09622 509 aaKnown RBP13.56□□□□□ -0.24
USP44-202ENST00000393091 CLCN5P51795 746 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 ARF5P84085 180 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 OASLQ15646 514 aaKnown RBP13.56□□□□□ -0.24
USP44-202ENST00000393091 GEN1Q17RS7 908 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 PJA1Q8NG27 643 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 USP33Q8TEY7 942 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 VAT1Q99536 393 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 MAK16Q9BXY0 300 aaKnown RBP13.56□□□□□ -0.24
USP44-202ENST00000393091 SAR1BQ9Y6B6 198 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 SHROOM3Q8TF72 1996 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 PRRT4C9JH25 899 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 ZNF821O75541 412 aaPredicted RBP13.56□□□□□ -0.24
USP44-202ENST00000393091 MZF1P28698 734 aaPredicted RBP13.56□□□□□ -0.24
USP44-202ENST00000393091 PAPOLAP51003 745 aaKnown RBP13.56□□□□□ -0.24
USP44-202ENST00000393091 HNRNPDQ14103 355 aaKnown RBP13.56□□□□□ -0.24
USP44-202ENST00000393091 MBLAC2Q68D91 279 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 RWDD4Q6NW29 188 aaKnown RBP13.56□□□□□ -0.24
USP44-202ENST00000393091 TPRG1Q6ZUI0 275 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 CIR1Q86X95 450 aaPredicted RBP13.56□□□□□ -0.24
USP44-202ENST00000393091 APCDD1Q8J025 514 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 SH2D3CQ8N5H7 860 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 HMCESQ96FZ2 354 aa13.56□□□□□ -0.24
USP44-202ENST00000393091 CFAP69A5D8W1 941 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 PPP1R12AO14974 1030 aaPredicted RBP13.55□□□□□ -0.24
USP44-202ENST00000393091 DAPK3O43293 454 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 CST8O60676 142 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 ITGAVP06756 1048 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 SSR1P43307 286 aaKnown RBP13.55□□□□□ -0.24
USP44-202ENST00000393091 SERPINH1P50454 418 aaKnown RBP13.55□□□□□ -0.24
USP44-202ENST00000393091 IER5LQ5T953 404 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 RUNDC3BQ96NL0 473 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 VPS51Q9UID3 782 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 KCNK3O14649 394 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 ATP5BP06576 529 aaKnown RBP13.55□□□□□ -0.24
USP44-202ENST00000393091 CASQ1P31415 396 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 ECT2LQ008S8 904 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 CWF19L1Q69YN2 538 aaKnown RBP13.55□□□□□ -0.24
USP44-202ENST00000393091 RFX6Q8HWS3 928 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 UCMAQ8WVF2 138 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 A0A0D9SEW6 157 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 POLR2EP19388 210 aaKnown RBP13.55□□□□□ -0.24
USP44-202ENST00000393091 SLC45A4Q5BKX6 768 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 RETSATQ6NUM9 610 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 C4orf22Q6V702 233 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 FBRSL1Q9HCM7 1045 aaKnown RBP13.55□□□□□ -0.24
USP44-202ENST00000393091 KLHL11Q9NVR0 708 aa13.55□□□□□ -0.24
USP44-202ENST00000393091 NUP205Q92621 2012 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 PGRMC1O00264 195 aaKnown RBP13.54□□□□□ -0.24
USP44-202ENST00000393091 LIASO43766 372 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 EGFP01133 1207 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 SP100P23497 879 aaPredicted RBP13.54□□□□□ -0.24
USP44-202ENST00000393091 GGCXP38435 758 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 GBE1Q04446 702 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 MESP2Q0VG99 397 aa13.54□□□□□ -0.24
USP44-202ENST00000393091 CAMK2GQ13555 558 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms