RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SLC1A6P48664 564 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 ATN1P54259 1190 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 POU5F1Q01860 360 aaKnown RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 TSC22D1Q15714 1073 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 CCDC85BQ15834 202 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 LSM12Q3MHD2 195 aaKnown RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 OTUD3Q5T2D3 398 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 KRT39Q6A163 491 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 ERAP2Q6P179 960 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 HAUS6Q7Z4H7 955 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 IFNEQ86WN2 208 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 LINC00469Q8N7U9 141 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 NSUN6Q8TEA1 469 aaKnown RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 MARK4Q96L34 752 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 C12orf10Q9HB07 376 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 TCF7L2Q9NQB0 619 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 SMYD2Q9NRG4 433 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 TMLHEQ9NVH6 421 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 ABI2Q9NYB9 513 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 NXF1Q9UBU9 619 aaKnown RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 NUP50Q9UKX7 468 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 COMMD10Q9Y6G5 202 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 TCRBV7S2A1N4TA0A589 114 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 POTEMA6NI47 508 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 PLK4O00444 970 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 PIK3R2O00459 728 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 SULT1C4O75897 302 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 ALAS1P13196 640 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 ATP5OP48047 213 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 OXA1LQ15070 435 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 GRIK5Q16478 980 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 CCNG2Q16589 344 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 PFKFB3Q16875 520 aaPredicted RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 FASTKD1Q53R41 847 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 ANKRD26P1Q6NSI1 321 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 METTL2BQ6P1Q9 378 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 CORO6Q6QEF8 472 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 ARSKQ6UWY0 536 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 HERC6Q8IVU3 1022 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 OFCC1Q8IZS5 231 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 ABHD11Q8NFV4 315 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 OR8K3Q8NH51 312 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 MAGEE2Q8TD90 523 aaPredicted RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 LRTOMTQ8WZ04 291 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 ZHX1-C8orf76Q96EF9 292 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 VCPIP1Q96JH7 1222 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 PRRG3Q9BZD7 231 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 SLA2Q9H6Q3 261 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 TRMT13Q9NUP7 481 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 NBNO60934 754 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 PLA2G4BP0C869 781 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 SAT1P21673 171 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 HOXD10P28358 340 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 EVI2BP34910 448 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 RPL35P42766 123 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 ATP6V0D1P61421 351 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 CLCQ05315 142 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 STX5Q13190 355 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 SELENBP1Q13228 472 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 CA9Q16790 459 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 KNOP1Q1ED39 458 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 ZBTB41Q5SVQ8 909 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 FAM205BPQ63HN1 556 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 DHRS4L2Q6PKH6 230 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 TDRPQ86YL5 185 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 BCL7CQ8WUZ0 217 aaPredicted RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 AFG1LQ8WV93 481 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 FAF2Q96CS3 445 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 ZNF512Q96ME7 567 aaPredicted RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 SPOCK3Q9BQ16 436 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 RTKNQ9BST9 563 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 ADI1Q9BV57 179 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 MRPL47Q9HD33 250 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 TRMT6Q9UJA5 497 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 RIC1Q4ADV7 1423 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 TEX51A0A1B0GUA7 166 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 H0YJX3 145 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 ZNF806P0C7X5 589 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 CKMT2P17540 419 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 TYK2P29597 1187 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 TRIM23P36406 574 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 GP5P40197 560 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 TMBIM6P55061 237 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 RHAGQ02094 409 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 CHRNEQ04844 493 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 CSTF3Q12996 717 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 PPP1R3AQ16821 1122 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 DALRD3Q5D0E6 543 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 RBM20Q5T481 1227 aaKnown RBP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 CIAPIN1Q6FI81 312 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 POLNQ7Z5Q5 900 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 SLC26A11Q86WA9 606 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 CHSY1Q86X52 802 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 DHFR2Q86XF0 187 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 TMEM126BQ8IUX1 230 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 OR8H3Q8N146 312 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.75□□□□□ -1.17
VTI1A-201ENST00000393077 CHURC1Q8WUH1 139 aa7.75□□□□□ -1.17
VTI1A-201ENST00000393077 ATP6V1E2Q96A05 226 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms