RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 PRKAA1Q13131 559 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 LRRC71Q8N4P6 559 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 SLC15A4Q8N697 577 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 TMEM161BQ8NDZ6 487 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 SHCBP1Q8NEM2 672 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 TCF12Q99081 682 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 RIT2Q99578 217 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 SLC29A1Q99808 456 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 ATXN3LQ9H3M9 355 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 TMED5Q9Y3A6 229 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 TRDMT1O14717 391 aaKnown RBP17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 TFECO14948 347 aaPredicted RBP17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 MYL4P12829 197 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 S100A5P33763 92 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 MRPS5P82675 430 aaKnown RBP17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 SLC18A2Q05940 514 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 SNAPC2Q13487 334 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 IKBKEQ14164 716 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 MYBPC2Q14324 1141 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 PAGE2Q7Z2X7 111 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 SLC35B2Q8TB61 432 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 ARHGEF1Q92888 912 aaKnown RBP17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 LENG9Q96B70 501 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 NYAP2Q9P242 653 aa17.27■□□□□ 0.36
TRAF3IP1-202ENST00000391993 E7ENX8 843 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SMIM18P0DKX4 95 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ETV4P43268 484 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 GBE1Q04446 702 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CD300CQ08708 224 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 GTF2H3Q13889 308 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ZNF423Q2M1K9 1284 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SCARA3Q6AZY7 606 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PRR23CQ6ZRP0 262 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TTC30AQ86WT1 665 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 VCPIP1Q96JH7 1222 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SYT11Q9BT88 431 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 MED10Q9BTT4 135 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SIK2Q9H0K1 926 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 IGSF9Q9P2J2 1179 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 DKK3Q9UBP4 350 aa17.27■□□□□ 0.35
TRAF3IP1-202ENST00000391993 DHRS12A0PJE2 317 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 H3BNX3 289 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CCRL2O00421 344 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RFPL1O75677 317 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CST3P01034 146 aaPredicted RBP17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SERPINB2P05120 415 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PIGFQ07326 219 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 TKFCQ3LXA3 575 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 DPY19L2P1Q6NXN4 242 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CDC26Q8NHZ8 85 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ARHGEF4Q9NR80 690 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NENFQ9UMX5 172 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SQORQ9Y6N5 450 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 BHMG1C9JSJ3 638 aaPredicted RBP17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PFDN6O15212 129 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PAPSS1O43252 624 aaPredicted RBP17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 LDLRP01130 860 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 C2P06681 752 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ENO2P09104 434 aaPredicted RBP17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 OLIG2Q13516 323 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NFYCQ13952 458 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 DNAJC14Q6Y2X3 702 aaPredicted RBP17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 FRA10AC1Q70Z53 315 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 EMID1Q96A84 441 aaPredicted RBP17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RPL10LQ96L21 214 aaKnown RBP17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NSMCE3Q96MG7 304 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PSAT1Q9Y617 370 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 COL1A1P02452 1464 aaPredicted RBP17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 EI24O14681 340 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 NCK1P16333 377 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ITGB5P18084 799 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 BMXP51813 675 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 JAK3P52333 1124 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SULT2A1Q06520 285 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PCSK7Q16549 785 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ZBED5Q49AG3 693 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RSPH1Q8WYR4 309 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 C1orf21Q9H246 121 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 APOBEC3GQ9HC16 384 aaKnown RBP17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CSADQ9Y600 493 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RGPD2P0DJD1 1756 aa17.26■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PDZK1P1A8MUH7 402 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RGL2O15211 777 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 CHADO15335 359 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 GNAO1P09471 354 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 IRF9Q00978 393 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 DLGAP5Q15398 846 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 OGFRL1Q5TC84 451 aaPredicted RBP17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 RPS27LQ71UM5 84 aaKnown RBP17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 AKAP14Q86UN6 197 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ADGRF2Q8IZF7 708 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SFRP1Q8N474 314 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 IPMKQ8NFU5 416 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 VPS39Q96JC1 886 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 PPP1R10Q96QC0 940 aaKnown RBP17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 SMARCAD1Q9H4L7 1026 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 ARIH1Q9Y4X5 557 aaPredicted RBP17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 LOC100506127A0A0U1RQW1 187 aa17.25■□□□□ 0.35
TRAF3IP1-202ENST00000391993 A8MV72 311 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms