RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CPB2Q96IY4 423 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 BCL2L14Q9BZR8 327 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 CISHQ9NSE2 258 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 C2CD2LO14523 706 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 TADA2AO75478 443 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 GARTP22102 1010 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 STAT5AP42229 794 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 MCFD2Q8NI22 146 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 ACTR8Q9H981 624 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 PSIP1O75475 530 aaKnown RBP16.39■□□□□ 0.21
SHANK1-204ENST00000391814 CALCAP01258 141 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 MUTP22033 750 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 POU5F1Q01860 360 aaKnown RBP16.39■□□□□ 0.21
SHANK1-204ENST00000391814 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
SHANK1-204ENST00000391814 ZNF720Q7Z2F6 126 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 PQLC1Q8N2U9 271 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 ANKEF1Q9NU02 776 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 KLK14Q9P0G3 267 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 GNEQ9Y223 722 aaKnown RBP16.39■□□□□ 0.21
SHANK1-204ENST00000391814 PRELID1Q9Y255 219 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 N6AMT1Q9Y5N5 214 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 A0A1W2PQ72 361 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 UBE2QL1A1L167 161 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 MICAL2O94851 1124 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 CRTAMO95727 393 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 HARS2P49590 506 aaKnown RBP16.39■□□□□ 0.21
SHANK1-204ENST00000391814 ZNF470Q6ECI4 717 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 MILR1Q7Z6M3 343 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 MYLPFQ96A32 169 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 RIT2Q99578 217 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 PNPOQ9NVS9 261 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 SLC17A7Q9P2U7 560 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 EGFL7Q9UHF1 273 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 STOML2Q9UJZ1 356 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 ABCA6Q8N139 1617 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 PLCL1Q15111 1095 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 GGA3Q9NZ52 723 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 ZNF112Q9UJU3 913 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 SIK3Q9Y2K2 1263 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 HAT1O14929 419 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 CCDC166P0CW27 439 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 DUPD1Q68J44 220 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 UCMAQ8WVF2 138 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 TMEM176AQ96HP8 235 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 RTKNQ9BST9 563 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 PLA2G12BQ9BX93 195 aa16.39■□□□□ 0.21
SHANK1-204ENST00000391814 CCDC162PA2VCL2 907 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 RTN3O95197 1032 aaPredicted RBP16.38■□□□□ 0.21
SHANK1-204ENST00000391814 YWHAZP63104 245 aaKnown RBP16.38■□□□□ 0.21
SHANK1-204ENST00000391814 OFCC1Q8IZS5 231 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 OR8H1Q8NGG4 311 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 TAMM41Q96BW9 452 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 TMEM94Q12767 1356 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 RGS14O43566 566 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 BNIP1Q12981 228 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 RFWD3Q6PCD5 774 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 EBF3Q9H4W6 596 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 DHRS12A0PJE2 317 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 EPN2O95208 641 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 HMGCRP04035 888 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 AMPD1P23109 780 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 ITGA3P26006 1051 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 TKTP29401 623 aaKnown RBP16.38■□□□□ 0.21
SHANK1-204ENST00000391814 NPTX2P47972 431 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 HIRAP54198 1017 aaPredicted RBP16.38■□□□□ 0.21
SHANK1-204ENST00000391814 MYL6P60660 151 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 CAMK2GQ13555 558 aaPredicted RBP16.38■□□□□ 0.21
SHANK1-204ENST00000391814 HPS6Q86YV9 775 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 ALLCQ8N6M5 410 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 C2orf69Q8N8R5 385 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 CMTM6Q9NX76 183 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 DAGLAQ9Y4D2 1042 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 E7ENX8 843 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 C9P02748 559 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 SLC2A3P11169 496 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 WDR59Q6PJI9 974 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 RAB43Q86YS6 212 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 LSM7Q9UK45 103 aaKnown RBP16.38■□□□□ 0.21
SHANK1-204ENST00000391814 SNX7Q9UNH6 387 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 MTRF1O75570 445 aaKnown RBP16.38■□□□□ 0.21
SHANK1-204ENST00000391814 GRK4P32298 578 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 MADCAM1Q13477 382 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 MED22Q15528 200 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 LRRC20Q8TCA0 184 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 SLITRK1Q96PX8 696 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 CDH22Q9UJ99 828 aa16.38■□□□□ 0.21
SHANK1-204ENST00000391814 MRPL42Q9Y6G3 142 aaKnown RBP16.38■□□□□ 0.21
SHANK1-204ENST00000391814 LIASO43766 372 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 ABHD2P08910 425 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 RBL1P28749 1068 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 ST8SIA6P61647 398 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 KATNAL2Q8IYT4 538 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 CCDC185Q8N715 623 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 CDH19Q9H159 772 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 EPB41L4BQ9H329 900 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 CIDEBQ9UHD4 219 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 FAM25EA8MYX2 175 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 NR4A1P22736 598 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 ERICH5Q6P6B1 374 aa16.37■□□□□ 0.21
SHANK1-204ENST00000391814 ECHDC2Q86YB7 292 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms