RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SH3KBP1Q96B97 665 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 AGO4Q9HCK5 861 aaKnown RBP20.01■□□□□ 0.79
SHANK1-203ENST00000391813 CRNNQ9UBG3 495 aaPredicted RBP20.01■□□□□ 0.79
SHANK1-203ENST00000391813 A0A1W2PPM1 405 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 EFCAB10A6NFE3 127 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 DDX3YO15523 660 aaKnown RBP20■□□□□ 0.79
SHANK1-203ENST00000391813 SLC2A3P11169 496 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 SP3Q02447 781 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 LPCAT4Q643R3 524 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 ANKS3Q6ZW76 656 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 PIWIL4Q7Z3Z4 852 aaKnown RBP20■□□□□ 0.79
SHANK1-203ENST00000391813 ZFPM1Q8IX07 1006 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 TRPM4Q8TD43 1214 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 ZFAND2BQ8WV99 257 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 POLE3Q9NRF9 147 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 DPP3Q9NY33 737 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 STK25O00506 426 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 PPP3CAQ08209 521 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 IL17AQ16552 155 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 ZRANB3Q5FWF4 1079 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 OTOP1Q7RTM1 612 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 GANCQ8TET4 914 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 PIK3C2AO00443 1686 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 SYNDIG1LA6NDD5 238 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 C2orf81A6NN90 581 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 IRF6O14896 467 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 ABCB1P08183 1280 aaPredicted RBP20■□□□□ 0.79
SHANK1-203ENST00000391813 RBL1P28749 1068 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 TAF6P49848 677 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 LRRC57Q8N9N7 239 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 LSM7Q9UK45 103 aaKnown RBP20■□□□□ 0.79
SHANK1-203ENST00000391813 TMEM88BA6NKF7 163 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 SNPHO15079 494 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 ARIH2O95376 493 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 CYP1A1P04798 512 aaPredicted RBP20■□□□□ 0.79
SHANK1-203ENST00000391813 ALDH7A1P49419 539 aaKnown RBP20■□□□□ 0.79
SHANK1-203ENST00000391813 ZNF276Q8N554 614 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 KBTBD8Q8NFY9 601 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 VAT1Q99536 393 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 SPATA16Q9BXB7 569 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 OSBPL6Q9BZF3 934 aa20■□□□□ 0.79
SHANK1-203ENST00000391813 METTL21CQ5VZV1 264 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 ARMCX6Q7L4S7 300 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 TDRPQ86YL5 185 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 DPY30Q9C005 99 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 ERVK-5Q9HDB9 667 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 ASTN1O14525 1302 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 FMO1Q01740 532 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 BMT2Q1RMZ1 405 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 KCNT2Q6UVM3 1135 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 FAM47BQ8NA70 645 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 PDPRQ8NCN5 879 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 RDH11Q8TC12 318 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 UBASH3BQ8TF42 649 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 ITFG2Q969R8 447 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 TBC1D13Q9NVG8 400 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 USP20Q9Y2K6 914 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 FAM95CA0A1B0GW59 222 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 OR1G1P47890 313 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 MAP4K3Q8IVH8 894 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 LRRC4CQ9HCJ2 640 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 MYOM1P52179 1685 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 BAZ2BQ9UIF8 2168 aaKnown RBP19.99■□□□□ 0.79
SHANK1-203ENST00000391813 BPGMP07738 259 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 PACS1Q6VY07 963 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 EGFL6Q8IUX8 553 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 ABCB10Q9NRK6 738 aa19.99■□□□□ 0.79
SHANK1-203ENST00000391813 FBXO21O94952 628 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 LBPP18428 481 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 NAA20P61599 178 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 IL31Q6EBC2 164 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 ACOT1Q86TX2 421 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 BLOC1S5Q8TDH9 187 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 RCN3Q96D15 328 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 CADM1Q9BY67 442 aaKnown RBP19.98■□□□□ 0.79
SHANK1-203ENST00000391813 MID1IP1Q9NPA3 183 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 DUSP12Q9UNI6 340 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 A0A087X1B8 175 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 TCRBV9S1A1TA0A576 114 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 ZMPSTE24O75844 475 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 GLP2RO95838 553 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 CYBBP04839 570 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 CASP5P51878 434 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 TRAP1Q12931 704 aaKnown RBP19.98■□□□□ 0.79
SHANK1-203ENST00000391813 DGCR6Q14129 220 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 SEZ6Q53EL9 994 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 FICDQ9BVA6 458 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 GNEQ9Y223 722 aaKnown RBP19.98■□□□□ 0.79
SHANK1-203ENST00000391813 ROBO1Q9Y6N7 1651 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 FKTNO75072 461 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 TSPAN9O75954 239 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 SLC1A5Q15758 541 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 C1orf186Q6ZWK4 172 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 KAT5Q92993 513 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 GINS4Q9BRT9 223 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 GPR63Q9BZJ6 419 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 PIF1Q9H611 641 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 SLC17A7Q9P2U7 560 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 SPATA2Q9UM82 520 aa19.98■□□□□ 0.79
SHANK1-203ENST00000391813 CHKBQ9Y259 395 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms