RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ADGRF1Q5T601 910 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 PYROXD1Q8WU10 500 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 ARNTL2Q8WYA1 636 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 BHMTQ93088 406 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 TEKT5Q96M29 485 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 TRIM56Q9BRZ2 755 aaKnown RBP12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 SLC46A2Q9BY10 475 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 IGSF9Q9P2J2 1179 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 RRP15Q9Y3B9 282 aaKnown RBP12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 CHD5Q8TDI0 1954 aa12.46□□□□□ -0.41
SPTBN1-203ENST00000389980 A0A0D9SEW6 157 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 ARHGAP42A6NI28 874 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 GOLGA6L10A6NI86 522 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 MATN3O15232 486 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 MTSS1O43312 755 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 GREM1O60565 184 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 RAMP2O60895 175 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 USP12O75317 370 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 TPSB2P20231 275 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 EIF3BP55884 814 aaKnown RBP12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 POLD3Q15054 466 aaPredicted RBP12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 TPSAB1Q15661 275 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 CEP128Q6ZU80 1094 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 MPP5Q8N3R9 675 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 SHKBP1Q8TBC3 707 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 GDPD5Q8WTR4 605 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 MYCBPQ99417 103 aaPredicted RBP12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 GBA3Q9H227 469 aa12.46□□□□□ -0.42
SPTBN1-203ENST00000389980 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 EPOPA6NHQ4 379 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 CDC25CP30307 473 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 ATP1A2P50993 1020 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 CRADDP78560 199 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 SLC5A9Q2M3M2 681 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 C5orf22Q49AR2 442 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 PPP1R21Q6ZMI0 780 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 MCUQ8NE86 351 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 SPATA22Q8NHS9 363 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 PABPC5Q96DU9 382 aaKnown RBP12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 GCNAQ96QF7 691 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 MLPHQ9BV36 600 aaPredicted RBP12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 CFAP97Q9P2B7 532 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 CTNNAL1Q9UBT7 734 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 TRHDEQ9UKU6 1024 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 CCL26Q9Y258 94 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 HCFC2Q9Y5Z7 792 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 ACTL7AQ9Y615 435 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 TEX264Q9Y6I9 313 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 MOSPD3O75425 235 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 PEX11BO96011 259 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 HLA-DQB2P05538 268 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 RHOP08100 348 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 IFI35P80217 286 aaPredicted RBP12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 ZNF33AQ06730 810 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 SLC10A7Q0GE19 358 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 TEAD2Q15562 447 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 RABGAP1LQ5R372 815 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 GPR158Q5T848 1215 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 ACBD5Q5T8D3 534 aaPredicted RBP12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 PALM2Q8IXS6 379 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 C12orf76Q8N812 135 aaPredicted RBP12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 OR7D4Q8NG98 312 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 AZIN2Q96A70 460 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 MRRFQ96E11 262 aaKnown RBP12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 CFAP36Q96G28 342 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 OXNAD1Q96HP4 312 aaPredicted RBP12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 ATP6V1G3Q96LB4 118 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 TTC25Q96NG3 672 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 IL12RB2Q99665 862 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 RABEP2Q9H5N1 569 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 SP110Q9HB58 689 aa12.45□□□□□ -0.42
SPTBN1-203ENST00000389980 RBM22Q9NW64 420 aaKnown RBP eCLIP12.45□□□□□ -0.421e-6■■□□□ 14.4
SPTBN1-203ENST00000389980 TRAV19A0A0A6YYK7 116 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 FOXO6A8MYZ6 492 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 RFXAPO00287 272 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 RASGRF2O14827 1237 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 EIF3HO15372 352 aaKnown RBP eCLIP12.44□□□□□ -0.421e-9■□□□□ 10.3
SPTBN1-203ENST00000389980 MT-CYBP00156 380 aaPredicted RBP12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 PTPN2P17706 415 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 ETFBP38117 255 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 MAGEA3P43357 314 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 MAPKAPK2P49137 400 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 CDH4P55283 916 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 SESN2P58004 480 aaPredicted RBP12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 MTA1Q13330 715 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 SERINC3Q13530 473 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 EFTUD2Q15029 972 aaKnown RBP eCLIP12.44□□□□□ -0.428e-7■■□□□ 12.6
SPTBN1-203ENST00000389980 PPP2R2DQ66LE6 453 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 TIGD7Q6NT04 549 aaPredicted RBP12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 Q6ZNB5 142 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 C3orf62Q6ZUJ4 267 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 GRASPQ7Z6J2 395 aaPredicted RBP12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 C10orf67Q8IYJ2 551 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 VAT1Q99536 393 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 APOL2Q9BQE5 337 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 FAM107BQ9H098 131 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 MAD1L1Q9Y6D9 718 aa12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 HELZP42694 1942 aaKnown RBP12.44□□□□□ -0.42
SPTBN1-203ENST00000389980 SPTBN5Q9NRC6 3674 aaKnown RBP12.43□□□□□ -0.42
SPTBN1-203ENST00000389980 A0A087WUV0 522 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms