RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 CIDEBQ9UHD4 219 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 COQ6Q9Y2Z9 468 aa14.5□□□□□ -0.09
RTF1-201ENST00000389629 MYO5AQ9Y4I1 1855 aaKnown RBP14.49□□□□□ -0.09
RTF1-201ENST00000389629 HNRNPLP14866 589 aaKnown RBP eCLIP14.49□□□□□ -0.09
RTF1-201ENST00000389629 IDH3AP50213 366 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 SPANXN3Q5MJ09 141 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 C1orf220Q5T0J3 134 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 NRG4Q8WWG1 115 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 SH3GL1Q99961 368 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 SLC25A23Q9BV35 468 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 TMEM134Q9H6X4 195 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 ROBO1Q9Y6N7 1651 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 ACKR2O00590 384 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 DLDP09622 509 aaKnown RBP14.49□□□□□ -0.09
RTF1-201ENST00000389629 CSH1P0DML2 217 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 CSH2P0DML3 217 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 ACAT1P24752 427 aaKnown RBP14.49□□□□□ -0.09
RTF1-201ENST00000389629 GK5Q6ZS86 529 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 ANKRD23Q86SG2 305 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 XYLT1Q86Y38 959 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 SIAH1Q8IUQ4 282 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 PLD5Q8N7P1 536 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 C12orf29Q8N999 325 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 DENND1AQ8TEH3 1009 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 LRTOMTQ8WZ04 291 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 FETUBQ9UGM5 382 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 IL1R2P27930 398 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 TTKP33981 857 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 SGO1Q5FBB7 561 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 SCN4BQ8IWT1 228 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 CHST13Q8NET6 341 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 BPIFB6Q8NFQ5 453 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 ZBED2Q9BTP6 218 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 RAD21L1Q9H4I0 556 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 POMKQ9H5K3 350 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 PCDH18Q9HCL0 1135 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 RNF19AQ9NV58 838 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 NDUFAF1Q9Y375 327 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 GOLGA8CPA6NN73 597 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 CXorf49A8MYA2 514 aaPredicted RBP14.49□□□□□ -0.09
RTF1-201ENST00000389629 MTSS1O43312 755 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 OGDHQ02218 1023 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 ABRAXAS1Q6UWZ7 409 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 MIER2Q8N344 545 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 SYT11Q9BT88 431 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 CXorf21Q9HAI6 301 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 ERAP1Q9NZ08 941 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 TJP2Q9UDY2 1190 aa14.49□□□□□ -0.09
RTF1-201ENST00000389629 TAF4O00268 1085 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 PSMD3O43242 534 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 ITM2AO43736 263 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 FCGR1AP12314 374 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 GJA8P48165 433 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 SLC7A2P52569 658 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 BCAT1P54687 386 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 GBE1Q04446 702 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 ZNF781Q8N8C0 355 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 BDH2Q9BUT1 245 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 ATXN3LQ9H3M9 355 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 SPAG4Q9NPE6 437 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 XPNPEP1Q9NQW7 623 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 ITGB1BP2Q9UKP3 347 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 CAB39Q9Y376 341 aaPredicted RBP14.48□□□□□ -0.09
RTF1-201ENST00000389629 IRF6O14896 467 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 TOP3BO95985 862 aaKnown RBP14.48□□□□□ -0.09
RTF1-201ENST00000389629 PGK2P07205 417 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 CCNG1P51959 295 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 KCTD4Q8WVF5 259 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 COQ10BQ9H8M1 238 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 ABCB10Q9NRK6 738 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 DNAJB4Q9UDY4 337 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 NENFQ9UMX5 172 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 DGKBQ9Y6T7 804 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 ZNF536O15090 1300 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 MYH1P12882 1939 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 MYH4Q9Y623 1939 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 IMPDH2P12268 514 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 MAGP20916 626 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 JAG1P78504 1218 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 SLC39A4Q6P5W5 647 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 GALNT18Q6P9A2 607 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 RELL1Q8IUW5 271 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 CELF6Q96J87 481 aaKnown RBP14.48□□□□□ -0.09
RTF1-201ENST00000389629 NSMCE2Q96MF7 247 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 SYBUQ9NX95 663 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 STK39Q9UEW8 545 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 GJB1P08034 283 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 NBPF12Q5TAG4 269 aaPredicted RBP14.48□□□□□ -0.09
RTF1-201ENST00000389629 OR52E8Q6IFG1 317 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 LINC00523Q86TU6 105 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 SKA1Q96BD8 255 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 ACO2Q99798 780 aaKnown RBP14.48□□□□□ -0.09
RTF1-201ENST00000389629 REXO4Q9GZR2 422 aaKnown RBP14.48□□□□□ -0.09
RTF1-201ENST00000389629 SP110Q9HB58 689 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 RAP2CQ9Y3L5 183 aa14.48□□□□□ -0.09
RTF1-201ENST00000389629 AGRPO00253 132 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 B4GALT5O43286 388 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 CRABP2P29373 138 aa14.47□□□□□ -0.09
RTF1-201ENST00000389629 DALRD3Q5D0E6 543 aaKnown RBP14.47□□□□□ -0.09
RTF1-201ENST00000389629 EEF1DP3Q658K8 133 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms