RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 PTP4A2Q12974 167 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 PRKG2Q13237 762 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 FHL2Q14192 279 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 ZNF268Q14587 947 aaPredicted RBP5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 SLC18A3Q16572 532 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 PRICKLE4Q2TBC4 344 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 FCRLBQ6BAA4 426 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 INO80CQ6PI98 192 aaPredicted RBP5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 NEK10Q6ZWH5 1172 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 B4GALNT4Q76KP1 1039 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 CYB5R4Q7L1T6 521 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 RTL10Q7L3V2 364 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 TFAP2DQ7Z6R9 452 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 LDLRAD3Q86YD5 345 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 ANKRD52Q8NB46 1076 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 METTL6Q8TCB7 284 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 BARD1Q99728 777 aaKnown RBP5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 TREX2Q9BQ50 279 aaPredicted RBP5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 EFHD1Q9BUP0 239 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 LMAN2LQ9H0V9 348 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 TXNRD2Q9NNW7 524 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 SEMA4BQ9NPR2 832 aaPredicted RBP5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 MPP6Q9NZW5 540 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 ARPP21Q9UBL0 812 aaPredicted RBP5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 FBXO4Q9UKT5 387 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 NAALADL1Q9UQQ1 740 aa5.84□□□□□ -1.47
RNU6-40P-201ENST00000384254 NCANO14594 1321 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 PI4KAP2A4QPH2 592 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 TTC36A6NLP5 189 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 KCNJ18B7U540 433 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 CCNDBP1O95273 360 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 UBL4AP11441 157 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 FCGR2AP12318 317 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 PSMA4P25789 261 aaKnown RBP5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 EPHA8P29322 1005 aaPredicted RBP5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 ABCD1P33897 745 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 SOX2P48431 317 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 EIF3BP55884 814 aaKnown RBP5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 UFM1P61960 85 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 TUBA4AP68366 448 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 EDRF1Q3B7T1 1238 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 TMEM119Q4V9L6 283 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 TMEM268Q5VZI3 342 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 CFAP161Q6P656 301 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 IGFN1Q86VF2 1251 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 CPXM2Q8N436 756 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 KLHL29Q96CT2 875 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 SDF4Q9BRK5 362 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 SLC32A1Q9H598 525 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 Q9N2J8 555 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 SEMA4GQ9NTN9 838 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 PEMTQ9UBM1 199 aa5.83□□□□□ -1.48
RNU6-40P-201ENST00000384254 C17orf113A0A1B0GUU1 675 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 KIF1CO43896 1103 aaKnown RBP5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 USO1O60763 962 aaKnown RBP5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 IL1AP01583 271 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 CLEC3BP05452 202 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 URODP06132 367 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 RARSP54136 660 aaKnown RBP5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 HSF1Q00613 529 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 RHAGQ02094 409 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 FOXD4Q12950 439 aaPredicted RBP5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 ERV3-1Q14264 604 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 TBCEQ15813 527 aaPredicted RBP5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 PROSER3Q2NL68 480 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 SLC45A4Q5BKX6 768 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 GPATCH4Q5T3I0 446 aaKnown RBP5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 STRIP1Q5VSL9 837 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 SPATA1Q5VX52 437 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 TTLL5Q6EMB2 1281 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 IL20RBQ6UXL0 311 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 ZNF813Q6ZN06 617 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 FASTKD5Q7L8L6 764 aaKnown RBP5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 NEK8Q86SG6 692 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 ADGRF4Q8IZF3 695 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 IP6K1Q92551 441 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 TEFMQ96QE5 360 aaKnown RBP5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 FRG2BQ96QU4 278 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 TM2D2Q9BX73 214 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 RANBP17Q9H2T7 1088 aaKnown RBP5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 TBC1D14Q9P2M4 693 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 FBXO40Q9UH90 709 aa5.82□□□□□ -1.48
RNU6-40P-201ENST00000384254 ARID1BQ8NFD5 2236 aaPredicted RBP5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 DYTNA2CJ06 578 aa5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 CXorf65A6NEN9 183 aa5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 CENPBP07199 599 aaPredicted RBP5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 SPARCP09486 303 aa5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 ACADMP11310 421 aa5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 POU1F1P28069 291 aa5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 CPA2P48052 419 aa5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 ELLP55199 621 aaPredicted RBP5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 YPEL5P62699 121 aa5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 DPTQ07507 201 aa5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 MAMLD1Q13495 774 aa5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 DCTN2Q13561 401 aaKnown RBP5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 EIF4A2Q14240 407 aaKnown RBP5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 SEMA3AQ14563 771 aa5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 VWA5B1Q5TIE3 1220 aa5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 NAPEPLDQ6IQ20 393 aa5.81□□□□□ -1.48
RNU6-40P-201ENST00000384254 TMEM81Q6P7N7 255 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms