RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 TMEM114B3SHH9 223 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 NRP1O14786 923 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 DYNC1LI2O43237 492 aaPredicted RBP15.25■□□□□ 0.03
CTNS-202ENST00000381870 PROZP22891 400 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 JAK1P23458 1154 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 ABCG1P45844 678 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 SESN2P58004 480 aaPredicted RBP15.25■□□□□ 0.03
CTNS-202ENST00000381870 DLG2Q15700 870 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 DEFB132Q7Z7B7 95 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 HACE1Q8IYU2 909 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 COA1Q9GZY4 146 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 POLR3FQ9H1D9 316 aaPredicted RBP15.25■□□□□ 0.03
CTNS-202ENST00000381870 GBA3Q9H227 469 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 ATAD3AQ9NVI7 634 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 RIC8BQ9NVN3 520 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 GPRC5DQ9NZD1 345 aa15.25■□□□□ 0.03
CTNS-202ENST00000381870 SUCOQ9UBS9 1254 aaKnown RBP15.25■□□□□ 0.03
CTNS-202ENST00000381870 TRIM64BA6NI03 449 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 ZNF839A8K0R7 811 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 APOL1O14791 398 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 KDM1AO60341 852 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 SNAP91O60641 907 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 TRIM13O60858 407 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 CYP2C9P11712 490 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 TPSB2P20231 275 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 MYF6P23409 242 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 SLC7A1P30825 629 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 HERC3Q15034 1050 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 TPSAB1Q15661 275 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 KCNJ8Q15842 424 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 BSPRYQ5W0U4 402 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 TRNP1Q6NT89 227 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 KCTD8Q6ZWB6 473 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 ARMCX6Q7L4S7 300 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 BTLAQ7Z6A9 289 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 CBR4Q8N4T8 237 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 DCLK2Q8N568 766 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 TNIP2Q8NFZ5 429 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 PCDH19Q8TAB3 1148 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 WNK4Q96J92 1243 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 UHRF1Q96T88 793 aaPredicted RBP15.24■□□□□ 0.03
CTNS-202ENST00000381870 MTMR12Q9C0I1 747 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 DHX35Q9H5Z1 703 aaKnown RBP15.24■□□□□ 0.03
CTNS-202ENST00000381870 ZDHHC2Q9UIJ5 367 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 DAPK2Q9UIK4 370 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 PRORSD1PA6NEY8 169 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 RGPD3A6NKT7 1758 aaPredicted RBP15.24■□□□□ 0.03
CTNS-202ENST00000381870 TFEBP19484 476 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 MATN1P21941 496 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 MGAT1P26572 445 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 RPL14P50914 215 aaKnown RBP15.24■□□□□ 0.03
CTNS-202ENST00000381870 HSD17B4P51659 736 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 TNK2Q07912 1038 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 LDLRAP1Q5SW96 308 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 CYS1Q717R9 158 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 RGPD4Q7Z3J3 1758 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 HPS1Q92902 700 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 MASTLQ96GX5 879 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 FBXL20Q96IG2 436 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 TARS2Q9BW92 718 aaKnown RBP15.24■□□□□ 0.03
CTNS-202ENST00000381870 CAB39LQ9H9S4 337 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 GMPR2Q9P2T1 348 aaKnown RBP15.24■□□□□ 0.03
CTNS-202ENST00000381870 GABBR1Q9UBS5 961 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 NXF1Q9UBU9 619 aaKnown RBP15.24■□□□□ 0.03
CTNS-202ENST00000381870 FZD1Q9UP38 647 aa15.24■□□□□ 0.03
CTNS-202ENST00000381870 BTAF1O14981 1849 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 TCRBV3S1A0A5B6 114 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 CCDC162PA2VCL2 907 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 TRIM64A6NGJ6 449 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 KCNH1O95259 989 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 PIGNO95427 931 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 MYCLP12524 364 aaPredicted RBP15.23■□□□□ 0.03
CTNS-202ENST00000381870 TFE3P19532 575 aaPredicted RBP15.23■□□□□ 0.03
CTNS-202ENST00000381870 MAP4P27816 1152 aaKnown RBP15.23■□□□□ 0.03
CTNS-202ENST00000381870 YAP1P46937 504 aaKnown RBP15.23■□□□□ 0.03
CTNS-202ENST00000381870 PHKG1Q16816 387 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 ARL13AQ5H913 290 aaPredicted RBP15.23■□□□□ 0.03
CTNS-202ENST00000381870 OFCC1Q8IZS5 231 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 CADM3Q8N126 398 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 CNTD1Q8N815 330 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 ANKFN1Q8N957 763 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 ADI1Q9BV57 179 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 TDRD1Q9BXT4 1180 aaKnown RBP15.23■□□□□ 0.03
CTNS-202ENST00000381870 NIF3L1Q9GZT8 377 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 ASNSD1Q9NWL6 643 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 TXNDC16Q9P2K2 825 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 CDYLQ9Y232 598 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 RAP2CQ9Y3L5 183 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 STYXL1Q9Y6J8 313 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 SLC30A1Q9Y6M5 507 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 SLC22A2O15244 555 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 EDN1P05305 212 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 HDCP19113 662 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 S100A1P23297 94 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 RAP1GAPP47736 663 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 JAK3P52333 1124 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 NSUN2Q08J23 767 aaKnown RBP eCLIP15.23■□□□□ 0.03
CTNS-202ENST00000381870 PDK2Q15119 407 aa15.23■□□□□ 0.03
CTNS-202ENST00000381870 CLPPQ16740 277 aaPredicted RBP15.23■□□□□ 0.03
CTNS-202ENST00000381870 FAM102AQ5T9C2 384 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms