RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 PITRM1Q5JRX3 1037 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 LRRC8EQ6NSJ5 796 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 TTC33Q6PID6 262 aaPredicted RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 DDHD1Q8NEL9 900 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 CYGBQ8WWM9 190 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 KLHL32Q96NJ5 620 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 EBNA1BP2Q99848 306 aaKnown RBP14.12□□□□□ -0.15
SDC1-202ENST00000381150 PLGRKTQ9HBL7 147 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 COPG2Q9UBF2 871 aa14.12□□□□□ -0.15
SDC1-202ENST00000381150 RNF103-CHMP3A0A140T963 221 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 PSMD12O00232 456 aaPredicted RBP14.11□□□□□ -0.15
SDC1-202ENST00000381150 APOL1O14791 398 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 ERBB2P04626 1255 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 NFICP08651 508 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 NR4A1P22736 598 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 C21orf59P57076 290 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 BNIP3Q12983 259 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 CCDC92Q53HC0 331 aaPredicted RBP14.11□□□□□ -0.15
SDC1-202ENST00000381150 TAPT1Q6NXT6 567 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 KCNT2Q6UVM3 1135 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 PACS1Q6VY07 963 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 ZBTB49Q6ZSB9 765 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 IFNLR1Q8IU57 520 aaPredicted RBP14.11□□□□□ -0.15
SDC1-202ENST00000381150 RXFP2Q8WXD0 754 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 PEBP4Q96S96 227 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 C1orf232A0A0U1RR37 186 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 A0A1W2PPW3 197 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 LACTBL1A8MY62 500 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 CHADO15335 359 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 BIRC5O15392 142 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 HDCP19113 662 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 ITGADQ13349 1161 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 PLD6Q8N2A8 252 aaKnown RBP14.11□□□□□ -0.15
SDC1-202ENST00000381150 CATSPER1Q8NEC5 780 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 ANKRD36BP1Q96IX9 119 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 TWNKQ96RR1 684 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 SORT1Q99523 831 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 OSBPL6Q9BZF3 934 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 RBM38Q9H0Z9 239 aaKnown RBP14.11□□□□□ -0.15
SDC1-202ENST00000381150 ASNSD1Q9NWL6 643 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 TUBGCP4Q9UGJ1 667 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 EMCNQ9ULC0 261 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 HES2Q9Y543 173 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 V9GYQ6 96 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 PLXNA1Q9UIW2 1896 aa14.11□□□□□ -0.15
SDC1-202ENST00000381150 C7orf72A4D263 438 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 PLOD2O00469 737 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 TIPRLO75663 272 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 PHKA2P46019 1235 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 NME5P56597 212 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 TAP1Q03518 808 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 GBE1Q04446 702 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 NOMO1Q15155 1222 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 GJC2Q5T442 439 aaPredicted RBP14.1□□□□□ -0.15
SDC1-202ENST00000381150 ERI1Q8IV48 349 aaKnown RBP14.1□□□□□ -0.15
SDC1-202ENST00000381150 PIWIL1Q96J94 861 aaKnown RBP14.1□□□□□ -0.15
SDC1-202ENST00000381150 APOL2Q9BQE5 337 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 FERMT1Q9BQL6 677 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 PCDH18Q9HCL0 1135 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 INIPQ9NRY2 104 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 BCAP29Q9UHQ4 241 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 COQ6Q9Y2Z9 468 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 TRIM17Q9Y577 477 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 CDY2AQ9Y6F7 541 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 CDY1Q9Y6F8 540 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 MYO18AQ92614 2054 aaKnown RBP14.1□□□□□ -0.15
SDC1-202ENST00000381150 RBM47A0AV96 593 aaKnown RBP14.1□□□□□ -0.15
SDC1-202ENST00000381150 IL18RAPO95256 599 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 TRUB2O95900 331 aaKnown RBP14.1□□□□□ -0.15
SDC1-202ENST00000381150 TNNC2P02585 160 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 INSRRP14616 1297 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 SERPINB9P50453 376 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 IRF9Q00978 393 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 TRAF2Q12933 501 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 NME3Q13232 169 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 PLD5Q8N7P1 536 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 DNAAF3Q8N9W5 541 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 SLC4A11Q8NBS3 891 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 SREK1Q8WXA9 508 aaKnown RBP14.1□□□□□ -0.15
SDC1-202ENST00000381150 APBA2Q99767 749 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 ERAP1Q9NZ08 941 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 AP4S1Q9Y587 144 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 LTFP02788 710 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 ARSAP15289 507 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 YAP1P46937 504 aaKnown RBP14.1□□□□□ -0.15
SDC1-202ENST00000381150 NAGLUP54802 743 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 YWHAEP62258 255 aaKnown RBP14.1□□□□□ -0.15
SDC1-202ENST00000381150 TTLL4Q14679 1199 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 TAZQ16635 292 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 LSM12Q3MHD2 195 aaKnown RBP14.1□□□□□ -0.15
SDC1-202ENST00000381150 C6orf183Q5T699 404 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 NAPRTQ6XQN6 538 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 SPNS2Q8IVW8 549 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 NAT16Q8N8M0 369 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 C12orf43Q96C57 262 aaKnown RBP14.1□□□□□ -0.15
SDC1-202ENST00000381150 MAML3Q96JK9 1138 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 SLC29A1Q99808 456 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 RTKNQ9BST9 563 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 EPB41L1Q9H4G0 881 aa14.1□□□□□ -0.15
SDC1-202ENST00000381150 RPF1Q9H9Y2 349 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms