RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CHKBQ9Y259 395 aa23.57■■□□□ 1.36
VPS16-201ENST00000380443 KIAA0100Q14667 2235 aaKnown RBP23.57■■□□□ 1.36
VPS16-201ENST00000380443 MSI1O43347 362 aaKnown RBP23.56■■□□□ 1.36
VPS16-201ENST00000380443 NBNO60934 754 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 UNC5CO95185 931 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 BPGMP07738 259 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 RHOQP17081 205 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 BGNP21810 368 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 CSE1LP55060 971 aaKnown RBP23.56■■□□□ 1.36
VPS16-201ENST00000380443 DDR2Q16832 855 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 ARTNQ5T4W7 220 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 CNTD1Q8N815 330 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 ARMC2Q8NEN0 867 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 DBF4BQ8NFT6 615 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 NPHS2Q9NP85 383 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 TLR8Q9NR97 1041 aaKnown RBP23.56■■□□□ 1.36
VPS16-201ENST00000380443 MYO16Q9Y6X6 1858 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 ZCWPW2A0A1B0GU75 182 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 PARNO95453 639 aaKnown RBP23.56■■□□□ 1.36
VPS16-201ENST00000380443 HNRNPH1P31943 449 aaKnown RBP23.56■■□□□ 1.36
VPS16-201ENST00000380443 PDE1BQ01064 536 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 TRIP4Q15650 581 aaPredicted RBP23.56■■□□□ 1.36
VPS16-201ENST00000380443 NLRP9Q7RTR0 991 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 UMODL1-AS1Q8N2C9 162 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 FCRL3Q96P31 734 aaPredicted RBP23.56■■□□□ 1.36
VPS16-201ENST00000380443 KIFC1Q9BW19 673 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 ENTPD7Q9NQZ7 604 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 SAR1AQ9NR31 198 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 GGT7Q9UJ14 662 aa23.56■■□□□ 1.36
VPS16-201ENST00000380443 ATP5BP06576 529 aaKnown RBP23.55■■□□□ 1.36
VPS16-201ENST00000380443 RASSF2P50749 326 aa23.55■■□□□ 1.36
VPS16-201ENST00000380443 CYB5D1Q6P9G0 228 aa23.55■■□□□ 1.36
VPS16-201ENST00000380443 NPAS4Q8IUM7 802 aa23.55■■□□□ 1.36
VPS16-201ENST00000380443 UNC5BQ8IZJ1 945 aa23.55■■□□□ 1.36
VPS16-201ENST00000380443 KLHL29Q96CT2 875 aa23.55■■□□□ 1.36
VPS16-201ENST00000380443 RBBP8Q99708 897 aa23.55■■□□□ 1.36
VPS16-201ENST00000380443 MYLK2Q9H1R3 596 aa23.55■■□□□ 1.36
VPS16-201ENST00000380443 OSER1Q9NX31 292 aa23.55■■□□□ 1.36
VPS16-201ENST00000380443 TIMM44O43615 452 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 ALDOAP04075 364 aaKnown RBP23.54■■□□□ 1.36
VPS16-201ENST00000380443 NQO1P15559 274 aaKnown RBP23.54■■□□□ 1.36
VPS16-201ENST00000380443 MAGEA12P43365 314 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 PGFP49763 221 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 KPNA1P52294 538 aaPredicted RBP23.54■■□□□ 1.36
VPS16-201ENST00000380443 RPL10AP62906 217 aaKnown RBP23.54■■□□□ 1.36
VPS16-201ENST00000380443 PCID2Q5JVF3 399 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 ANKS3Q6ZW76 656 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 ASRGL1Q7L266 308 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 FBXO32Q969P5 355 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 ERP27Q96DN0 273 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 BTN2A3PQ96KV6 586 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 TBL1YQ9BQ87 522 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 MRM3Q9HC36 420 aaKnown RBP23.54■■□□□ 1.36
VPS16-201ENST00000380443 ALG13Q9NP73 1137 aaKnown RBP23.54■■□□□ 1.36
VPS16-201ENST00000380443 ARHGEF3Q9NR81 526 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 PIH1D1Q9NWS0 290 aaKnown RBP23.54■■□□□ 1.36
VPS16-201ENST00000380443 GMIPQ9P107 970 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 NUP205Q92621 2012 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 TPP1O14773 563 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 TBC1D4O60343 1298 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 USP12O75317 370 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 MPOP05164 745 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 ERVK-10P10266 1014 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 SERPINB8P50452 374 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 ARFIP2P53365 341 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 LIMK2P53671 638 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 TEDDM1Q5T9Z0 273 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 PDPK2PQ6A1A2 396 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 FUT10Q6P4F1 479 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 POTEHQ6S545 545 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 CEP57Q86XR8 500 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 SIKE1Q9BRV8 207 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 ZYG11BQ9C0D3 744 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 PRDM5Q9NQX1 630 aaPredicted RBP23.54■■□□□ 1.36
VPS16-201ENST00000380443 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.54■■□□□ 1.36
VPS16-201ENST00000380443 TMEM248Q9NWD8 314 aa23.54■■□□□ 1.36
VPS16-201ENST00000380443 IGLV3-10A0A075B6K4 115 aa23.53■■□□□ 1.36
VPS16-201ENST00000380443 MGRN1O60291 552 aa23.53■■□□□ 1.36
VPS16-201ENST00000380443 DNAJC6O75061 913 aa23.53■■□□□ 1.36
VPS16-201ENST00000380443 TMPRSS15P98073 1019 aa23.53■■□□□ 1.36
VPS16-201ENST00000380443 RIPK1Q13546 671 aa23.53■■□□□ 1.36
VPS16-201ENST00000380443 GPNMBQ14956 572 aa23.53■■□□□ 1.36
VPS16-201ENST00000380443 CERCAMQ5T4B2 595 aa23.53■■□□□ 1.36
VPS16-201ENST00000380443 ZNF683Q8IZ20 524 aa23.53■■□□□ 1.36
VPS16-201ENST00000380443 INPP5DQ92835 1189 aa23.53■■□□□ 1.36
VPS16-201ENST00000380443 CDK5RAP1Q96SZ6 601 aaKnown RBP23.53■■□□□ 1.36
VPS16-201ENST00000380443 GPR62Q9BZJ7 368 aa23.53■■□□□ 1.36
VPS16-201ENST00000380443 RETREG1Q9H6L5 497 aa23.53■■□□□ 1.36
VPS16-201ENST00000380443 MARCH5Q9NX47 278 aa23.53■■□□□ 1.36
VPS16-201ENST00000380443 CPB1P15086 417 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 TYK2P29597 1187 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 POLD2P49005 469 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 SLC11A1P49279 550 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 ELF3P78545 371 aaPredicted RBP23.52■■□□□ 1.36
VPS16-201ENST00000380443 RING1Q06587 406 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 HNRNPDQ14103 355 aaKnown RBP23.52■■□□□ 1.36
VPS16-201ENST00000380443 PDE1CQ14123 709 aaPredicted RBP23.52■■□□□ 1.36
VPS16-201ENST00000380443 CCDC153Q494R4 210 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 PIK3R6Q5UE93 754 aa23.52■■□□□ 1.36
VPS16-201ENST00000380443 OTOP3Q7RTS5 596 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms