RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 SLC17A7Q9P2U7 560 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 STON1Q9Y6Q2 735 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 DGKBQ9Y6T7 804 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 DNALI1O14645 258 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 TP73O15350 636 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 PRKCBP05771 671 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 KRT18P05783 430 aaKnown RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 OR52Z1P0C646 297 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 KITP10721 976 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 CDH5P33151 784 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 GALCP54803 685 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 SCRN3Q0VDG4 424 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 ESCO2Q56NI9 601 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 C15orf52Q6ZUT6 534 aaKnown RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 TLK2Q86UE8 772 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 TRIM59Q8IWR1 403 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 LILRA2Q8N149 483 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 VCPIP1Q96JH7 1222 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 KLF6Q99612 283 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 C20orf96Q9NUD7 363 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 PKD2L1Q9P0L9 805 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 MARCOQ9UEW3 520 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-204ENST00000380393 CYB5R1Q9UHQ9 305 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 ZNF175Q9Y473 711 aa9.54□□□□□ -0.88
PTPRA-204ENST00000380393 MROH5Q6ZUA9 1318 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 E5RJQ4 531 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 FOXN3O00409 490 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-204ENST00000380393 ATG13O75143 517 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 CLEC2LP0C7M8 214 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 CYP2D6P10635 497 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 PIK3R1P27986 724 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 L1CAMP32004 1257 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 NAPAP54920 295 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 GRAPQ13588 217 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 PRKD1Q15139 912 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-204ENST00000380393 ATAD3CQ5T2N8 411 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 CENPPQ6IPU0 288 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 CDH24Q86UP0 819 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 TMEM126BQ8IUX1 230 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 ZNF276Q8N554 614 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 GRAPLQ8TC17 118 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-204ENST00000380393 FNIP1Q8TF40 1166 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 FRS2Q8WU20 508 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 ST8SIA2Q92186 375 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 KCNK16Q96T55 309 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 SEC22CQ9BRL7 303 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 BMP2KQ9NSY1 1161 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-204ENST00000380393 TAS2R7Q9NYW3 318 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 NXF1Q9UBU9 619 aaKnown RBP9.53□□□□□ -0.88
PTPRA-204ENST00000380393 PRKAG2Q9UGJ0 569 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 COL4A3BPQ9Y5P4 624 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 TCRBV7S2A1N4TA0A589 114 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 H0Y858 1186 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 TOR1BO14657 336 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 PIGNO95427 931 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 IFNA16P05015 189 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 ITGB3P05106 788 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 GSNP06396 782 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 POU2F1P14859 743 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 ATF2P15336 505 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 PTPN1P18031 435 aaKnown RBP9.53□□□□□ -0.88
PTPRA-204ENST00000380393 MMP8P22894 467 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 NPY2RP49146 381 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 TOP3AQ13472 1001 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-204ENST00000380393 GSTA5Q7RTV2 222 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 BBS7Q8IWZ6 715 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 GJA10Q969M2 543 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 FAM149B1Q96BN6 582 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 SNX7Q9UNH6 387 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 VWA7Q9Y334 891 aa9.53□□□□□ -0.88
PTPRA-204ENST00000380393 POTEMA6NI47 508 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 ZNF98A6NK75 572 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 PI4K2BG5E9Z4 385 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 PLOD2O00469 737 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 TRIM16O95361 564 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 SLC9A1P19634 815 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 GCAP28676 217 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 TALDO1P37837 337 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 AQP5P55064 265 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 JAM2P57087 298 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 ZMYND11Q15326 602 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 PLA2G4EQ3MJ16 856 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 PM20D1Q6GTS8 502 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 PIWIL3Q7Z3Z3 882 aaKnown RBP9.52□□□□□ -0.88
PTPRA-204ENST00000380393 CCDC60Q8IWA6 550 aaPredicted RBP9.52□□□□□ -0.88
PTPRA-204ENST00000380393 UBL4BQ8N7F7 174 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 S100ZQ8WXG8 99 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 POMGNT1Q8WZA1 660 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 SGK3Q96BR1 496 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 FAM84BQ96KN1 310 aaPredicted RBP9.52□□□□□ -0.88
PTPRA-204ENST00000380393 EPS8L2Q9H6S3 715 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 ACP6Q9NPH0 428 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 TEKT2Q9UIF3 430 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 PSME2Q9UL46 239 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 PMF1-BGLAPU3KQ54 211 aa9.52□□□□□ -0.88
PTPRA-204ENST00000380393 C6orf229H3BNL8 230 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 NOP56O00567 594 aaKnown RBP9.52□□□□□ -0.89
PTPRA-204ENST00000380393 SLITRK5O94991 958 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 FMO4P31512 558 aa9.52□□□□□ -0.89
PTPRA-204ENST00000380393 CDC20Q12834 499 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms