RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 RAD54BQ9Y620 910 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 TLL2Q9Y6L7 1015 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 THSD7BQ9C0I4 1608 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 KLHL33A6NCF5 533 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 C19orf67A6NJJ6 358 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 IRAK2O43187 625 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 HAUS5O94927 633 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 MT-CYBP00156 380 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 GM2AP17900 193 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 ARRB2P32121 409 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 GPR15P49685 360 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 YWHAHQ04917 246 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 ZBTB16Q05516 673 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 DLG2Q15700 870 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 ACCSLQ4AC99 568 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 ANKRD20A4Q4UJ75 823 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 CLLU1OSQ5K130 101 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 TEDDM1Q5T9Z0 273 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 ARHGAP12Q8IWW6 846 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 PLD6Q8N2A8 252 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 FAM13CQ8NE31 585 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 LRRC40Q9H9A6 602 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 SAR1AQ9NR31 198 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 ARHGEF38Q9NXL2 777 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 BFARQ9NZS9 450 aa8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 ABT1Q9ULW3 272 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-204ENST00000380176 FCHO1O14526 889 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 TRAFD1O14545 582 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 PLIN3O60664 434 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 DNAJC6O75061 913 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 FGF3P11487 239 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 MX2P20592 715 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 NMBRP28336 390 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 PTPN4P29074 926 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 SERPINB6P35237 376 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 PCLAFQ15004 111 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 SLC39A12Q504Y0 691 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 SPDYAQ5MJ70 313 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 WLSQ5T9L3 541 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 ATG16L1Q676U5 607 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 MBLAC2Q68D91 279 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 STRA8Q7Z7C7 330 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 JAZF1Q86VZ6 243 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 SPATA2LQ8IUW3 424 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 SCN4BQ8IWT1 228 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 THEM5Q8N1Q8 247 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 DCLK2Q8N568 766 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 LINC01599Q8WXQ3 324 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 EBF4Q9BQW3 602 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 TRPV6Q9H1D0 765 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 OSBPL2Q9H1P3 480 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 CAB39LQ9H9S4 337 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 DNAJB4Q9UDY4 337 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 TRHDEQ9UKU6 1024 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 DSEQ9UL01 958 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 CASP8AP2Q9UKL3 1982 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 DOCK4Q8N1I0 1966 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 HAX1O00165 279 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 KIF3CO14782 793 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 BIRC5O15392 142 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 USP1O94782 785 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 MOCS2O96007 188 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 TYK2P29597 1187 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 GP5P40197 560 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 GTF2A1P52655 376 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 AQP5P55064 265 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 TSPY1Q01534 308 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 STX3Q13277 289 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 ZRSR2Q15696 482 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 PREPLQ4J6C6 727 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 BTBD8Q5XKL5 378 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 FSTL4Q6MZW2 842 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 KYAT3Q6YP21 454 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 C14orf80Q86SX3 495 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 C10orf107Q8IVU9 208 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 SCML4Q8N228 414 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 ACMSDQ8TDX5 336 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 ATP2A3Q93084 1043 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 FCRL2Q96LA5 508 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 RAB3IPQ96QF0 476 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 RBBP8Q99708 897 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 CPNE1Q99829 537 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 CADM1Q9BY67 442 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 SLC39A8Q9C0K1 460 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 BRD8Q9H0E9 1235 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 SNX15Q9NRS6 342 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 ABCC13Q9NSE7 274 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 ABI2Q9NYB9 513 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 MPP6Q9NZW5 540 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 TXNDC16Q9P2K2 825 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 LNPEPQ9UIQ6 1025 aa8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 HBS1LQ9Y450 684 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-204ENST00000380176 FNDC1Q4ZHG4 1894 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 A0A1W2PQH9 124 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 MAFKO60675 156 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 GLRA3O75311 464 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 PROCP04070 461 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 CKBP12277 381 aa8.11□□□□□ -1.11
PDLIM5-204ENST00000380176 GRK4P32298 578 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms