RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 DENND2DQ9H6A0 471 aaPredicted RBP6.96□□□□□ -1.29
NFX1-202ENST00000379521 ZNF408Q9H9D4 720 aa6.96□□□□□ -1.29
NFX1-202ENST00000379521 KRT82Q9NSB4 513 aa6.96□□□□□ -1.29
NFX1-202ENST00000379521 ABCC13Q9NSE7 274 aa6.96□□□□□ -1.29
NFX1-202ENST00000379521 CPA4Q9UI42 421 aa6.96□□□□□ -1.29
NFX1-202ENST00000379521 GABRQQ9UN88 632 aa6.96□□□□□ -1.29
NFX1-202ENST00000379521 TRIM33Q9UPN9 1127 aa6.96□□□□□ -1.29
NFX1-202ENST00000379521 MED16Q9Y2X0 877 aa6.96□□□□□ -1.29
NFX1-202ENST00000379521 WDR27A2RRH5 827 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 MATN2O00339 956 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 GRID2O43424 1007 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 ITGB1P05556 798 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 ODC1P11926 461 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 PCSK1P29120 753 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 ZFP36L2P47974 494 aaKnown RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 ADARP55265 1226 aaKnown RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 UGT3A2Q3SY77 523 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 POTEHQ6S545 545 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 ZC3H18Q86VM9 953 aaKnown RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 HERC6Q8IVU3 1022 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 PALM2Q8IXS6 379 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 OR13J1Q8NGT2 312 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 OR6B3Q8NGW1 331 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 ACTRT2Q8TDY3 377 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 NDRG1Q92597 394 aaKnown RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 UHRF1Q96T88 793 aaPredicted RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 TMEM120AQ9BXJ8 343 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 SNX25Q9H3E2 840 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 C12orf65Q9H3J6 166 aaKnown RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 NSMCE4AQ9NXX6 385 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 NPHS1O60500 1241 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 GRAP2O75791 330 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 KRT38O76015 456 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 TM7SF2O76062 418 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 DDHD2O94830 711 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 CELF2O95319 508 aaKnown RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 CA4P22748 312 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 MLH1P40692 756 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 IDH3AP50213 366 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 DYNLT1P63172 113 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 ATP11AP98196 1134 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 BEX3Q00994 111 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 SATB1Q01826 763 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 DLG1Q12959 904 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 GRM2Q14416 872 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 KRT81Q14533 505 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 LLGL1Q15334 1064 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 TRIP4Q15650 581 aaPredicted RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 FSTL4Q6MZW2 842 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 PKN3Q6P5Z2 889 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 BNC2Q6ZN30 1099 aaPredicted RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 TRMT1LQ7Z2T5 733 aaKnown RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 NET1Q7Z628 596 aaPredicted RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 ACVR1CQ8NER5 493 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 GDAP1Q8TB36 358 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 ZNF599Q96NL3 588 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 HHIPQ96QV1 700 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 TMEM175Q9BSA9 504 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 DMAP1Q9NPF5 467 aaPredicted RBP6.96□□□□□ -1.3
NFX1-202ENST00000379521 TBK1Q9UHD2 729 aa6.96□□□□□ -1.3
NFX1-202ENST00000379521 H3BNX3 289 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 ITM2AO43736 263 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 VPS41P49754 854 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 ACTR3P61158 418 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 PFKPQ01813 784 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 GLRA4Q5JXX5 417 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 HEATR6Q6AI08 1181 aaKnown RBP6.95□□□□□ -1.3
NFX1-202ENST00000379521 PHYKPLQ8IUZ5 450 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 LMNTD2Q8IXW0 634 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 PGBD5Q8N414 524 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 TMEM209Q96SK2 561 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 VPS37BQ9H9H4 285 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 NMUR1Q9HB89 426 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 LRRC4Q9HBW1 653 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 STX18Q9P2W9 335 aaKnown RBP6.95□□□□□ -1.3
NFX1-202ENST00000379521 SSX2IPQ9Y2D8 614 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 HS3ST4Q9Y661 456 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 A8MUI8 341 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 SLC7A4O43246 635 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 PEX1O43933 1283 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 C1RP00736 705 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 MT-ND3P03897 115 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 SERPINE1P05121 402 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 CKBP12277 381 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 ACADSP16219 412 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 MX2P20592 715 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 BGNP21810 368 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 ATP4BP51164 291 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 DEUP1Q05D60 604 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 BSPRYQ5W0U4 402 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 PLD6Q8N2A8 252 aaKnown RBP6.95□□□□□ -1.3
NFX1-202ENST00000379521 LRRC8CQ8TDW0 803 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 ZNF689Q96CS4 500 aaPredicted RBP6.95□□□□□ -1.3
NFX1-202ENST00000379521 MRRFQ96E11 262 aaKnown RBP6.95□□□□□ -1.3
NFX1-202ENST00000379521 NSL1Q96IY1 281 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 CCDC28BQ9BUN5 200 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 ACE2Q9BYF1 805 aaPredicted RBP6.95□□□□□ -1.3
NFX1-202ENST00000379521 RABEP2Q9H5N1 569 aa6.95□□□□□ -1.3
NFX1-202ENST00000379521 CD248Q9HCU0 757 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms