RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 MLPHQ9BV36 600 aaPredicted RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 MRPL9Q9BYD2 267 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 ABI2Q9NYB9 513 aaPredicted RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 IL37Q9NZH6 218 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 PCDHB7Q9Y5E2 793 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 RPS6KL1Q9Y6S9 549 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 SHROOM3Q8TF72 1996 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 A0A1W2PQH9 124 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 FAM92AA1XBS5 289 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 WDR91A4D1P6 747 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 F5H423 210 aaPredicted RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 H7C4K7 107 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 MATN3O15232 486 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 B4GALT3O60512 393 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 UGT1A9O60656 530 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 ATP5BP06576 529 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 SPRP35270 261 aaPredicted RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 GEMP55040 296 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 CSE1LP55060 971 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 SF3A3Q12874 501 aaKnown RBP eCLIP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 BMPR2Q13873 1038 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 CTXN3Q4LDR2 81 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 MROH9Q5TGP6 573 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 FBXW10Q5XX13 1052 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 AFMIDQ63HM1 303 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 ARHGAP12Q8IWW6 846 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 RTL3Q8N8U3 475 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 ATP6V0D2Q8N8Y2 350 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 NETO2Q8NC67 525 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 STKLD1Q8NE28 680 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 ZSCAN18Q8TBC5 510 aaPredicted RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 SPPL2BQ8TCT7 592 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 SEPT8Q92599 483 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 ISL2Q96A47 359 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 ZNF669Q96BR6 464 aaPredicted RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 SLC39A13Q96H72 371 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 FCRL2Q96LA5 508 aaPredicted RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 AGAP3Q96P47 875 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 FCRL5Q96RD9 977 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 TMEM175Q9BSA9 504 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 TUBB6Q9BUF5 446 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 SIK2Q9H0K1 926 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 UGT1A7Q9HAW7 530 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 UGT1A10Q9HAW8 530 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 UGT1A8Q9HAW9 530 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 KLC4Q9NSK0 619 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 PCMTD2Q9NV79 361 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 CLIC5Q9NZA1 410 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 SIRPGQ9P1W8 387 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 DCDC2Q9UHG0 476 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 SOX13Q9UN79 622 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 MTO1Q9Y2Z2 717 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 SNX10Q9Y5X0 201 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 VWA8A3KMH1 1905 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 HMX2A2RU54 273 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 E9PAM4 449 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 F8W810 466 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 DFFAO00273 331 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 PITPNM1O00562 1244 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 UNC5CO95185 931 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 JCHAINP01591 159 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 ITGA2BP08514 1039 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 OR4Q2P0C623 313 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 NQO1P15559 274 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 BGNP21810 368 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 FGFR3P22607 806 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 HNRNPH1P31943 449 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 HADHAP40939 763 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 CDK7P50613 346 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 RASSF2P50749 326 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 MLLT6P55198 1093 aaPredicted RBP10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 TLE2Q04725 743 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 ANKRD20A4Q4UJ75 823 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 PLEKHG4Q58EX7 1191 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 FAM182AQ5T1J6 154 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 CYB5D1Q6P9G0 228 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 CDHR3Q6ZTQ4 885 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 NLRP9Q7RTR0 991 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 NUDCD3Q8IVD9 361 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 PTCD2Q8WV60 388 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 E2F7Q96AV8 911 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 KLHL29Q96CT2 875 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 FAM122AQ96E09 287 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 SPATA17Q96L03 361 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 CEP295NLQ96MC4 621 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 NECAB3Q96P71 396 aaPredicted RBP10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 SIKE1Q9BRV8 207 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 TRIM56Q9BRZ2 755 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 MYLK2Q9H1R3 596 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 NMUR1Q9HB89 426 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 GLOD4Q9HC38 313 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 SAR1AQ9NR31 198 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 PPARGC1AQ9UBK2 798 aaKnown RBP10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 SFMBT1Q9UHJ3 866 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 LRFN2Q9ULH4 789 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 CHKBQ9Y259 395 aa10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 PRG3Q9Y2Y8 225 aaPredicted RBP10.68□□□□□ -0.7
POLR2J3-201ENST00000379340 ENPP3O14638 875 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 TIMM44O43615 452 aa10.67□□□□□ -0.7
POLR2J3-201ENST00000379340 MGRN1O60291 552 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms