RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 SIM1P81133 766 aaPredicted RBP25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 CCDC14Q49A88 953 aa25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 STRADAQ7RTN6 431 aa25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 APTXQ7Z2E3 356 aaKnown RBP25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 PHF13Q86YI8 300 aaPredicted RBP25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 NAXDQ8IW45 347 aa25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 DCAF4L2Q8NA75 395 aa25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 C1orf216Q8TAB5 229 aa25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 JOSD2Q8TAC2 188 aa25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 SKA1Q96BD8 255 aa25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 VPS51Q9UID3 782 aa25.28■■□□□ 1.64
TNFRSF4-201ENST00000379236 TBC1D3DA0A087WVF3 549 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 TBC1D3IA0A087WXS9 549 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 TBC1D3EA0A087X179 549 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 TBC1D3KA0A087X1G2 549 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 SPAARA0A1B0GVQ0 90 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 TBC1D3FA6NER0 549 aaPredicted RBP25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 C2CD4BA6NLJ0 364 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 TBC1D3LB9A6J9 549 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 SNAP91O60641 907 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 ENDOD1O94919 500 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 GJB6O95452 261 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 TBC1D3HP0C7X1 549 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 SRCP12931 536 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 GPD1P21695 349 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 PTPN9P43378 593 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 ADPRHP54922 357 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 C21orf59P57076 290 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 SHC2P98077 582 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 HLA-BQ31612 363 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 TBC1D3GQ6DHY5 549 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 TBC1D3CQ6IPX1 549 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 RWDD4Q6NW29 188 aaKnown RBP25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 DNAJC24Q6P3W2 148 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 ZNF783Q6ZMS7 281 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 TBC1D3Q8IZP1 549 aaPredicted RBP25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 C3orf20Q8ND61 904 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 FAM172AQ8WUF8 416 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 SPON2Q9BUD6 331 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 TPX2Q9ULW0 747 aaKnown RBP25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 HS3ST2Q9Y278 367 aa25.27■■□□□ 1.64
TNFRSF4-201ENST00000379236 A0A1W2PPC4 97 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 ILVBLA1L0T0 632 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 SH3BP5O60239 455 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 GJB3O75712 270 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 IGHV4-34P06331 123 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 RECQLP46063 649 aaPredicted RBP25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 ZNF165P49910 485 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 GSCP56915 257 aaPredicted RBP25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 PTP4A2Q12974 167 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 RETSATQ6NUM9 610 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 DRC7Q8IY82 874 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 PIP4K2CQ8TBX8 421 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 SETD7Q8WTS6 366 aaKnown RBP25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 PSMB7Q99436 277 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 ACE2Q9BYF1 805 aaPredicted RBP25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 ATP13A1Q9HD20 1204 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 AASDHPPTQ9NRN7 309 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 TM7SF3Q9NS93 570 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 PPARGC1AQ9UBK2 798 aaKnown RBP25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 OR12D3Q9UGF7 316 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 ANKRD6Q9Y2G4 727 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 SLCO1B1Q9Y6L6 691 aa25.26■■□□□ 1.63
TNFRSF4-201ENST00000379236 A0A0D9SEW6 157 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 CBX4O00257 560 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 MCF2LO15068 1137 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 ZNF883P0CG24 379 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 TNFAIP3P21580 790 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 ADRA1BP35368 520 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 CCR5P51681 352 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 CLCN6P51797 869 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 RACK1P63244 317 aaKnown RBP25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 TPM4P67936 248 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 C1QBPQ07021 282 aaKnown RBP25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 KIF19Q2TAC6 998 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 OR7D4Q8NG98 312 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 IL21RQ9HBE5 538 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 RTN4Q9NQC3 1192 aaKnown RBP25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 DYRK4Q9NR20 520 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 SNX11Q9Y5W9 270 aa25.25■■□□□ 1.63
TNFRSF4-201ENST00000379236 SLC7A4O43246 635 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 TEX33O43247 280 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 RRM1P23921 792 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 RFC1P35251 1148 aaPredicted RBP25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 DRD3P35462 400 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 ETFBP38117 255 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 BNC1Q01954 994 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 CCDC15Q0P6D6 951 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 SUZ12Q15022 739 aaKnown RBP25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 POM121L1PQ3SYA9 428 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 SLC45A4Q5BKX6 768 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 PPP1R2P3Q6NXS1 205 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 LINGO4Q6UY18 593 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 MON1BQ7L1V2 547 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 SLC6A18Q96N87 628 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 CAMK1GQ96NX5 476 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 MYO6Q9UM54 1294 aa25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 FNDC3AQ9Y2H6 1198 aaKnown RBP25.24■■□□□ 1.63
TNFRSF4-201ENST00000379236 SIGLEC16A6NMB1 481 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms