RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 DERAQ9Y315 318 aa11.47□□□□□ -0.57
RPGR-203ENST00000378505 BTN3A1O00481 513 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 CLOCKO15516 846 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 ENTPD5O75356 428 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 SLC25A3Q00325 362 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 CNTN1Q12860 1018 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 TTC27Q6P3X3 843 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 TERB1Q8NA31 727 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 PYDC1Q8WXC3 89 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 RMND5BQ96G75 393 aaPredicted RBP11.46□□□□□ -0.57
RPGR-203ENST00000378505 GPR20Q99678 358 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 LRMDAQ9H2I8 198 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 SELENONQ9NZV5 590 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 COL20A1Q9P218 1284 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 ATP11BQ9Y2G3 1177 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 TTLL13PA6NNM8 815 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 ZNF862O60290 1169 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 ZNF682O95780 498 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 ARL2P36404 184 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 PKNOX1P55347 436 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 NCALDP61601 193 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 VAC14Q08AM6 782 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 PGS1Q32NB8 556 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 CYP2R1Q6VVX0 501 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 TSHZ1Q6ZSZ6 1077 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 STAG3L4Q8TBR4 150 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 TSPAN18Q96SJ8 248 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 NTPCRQ9BSD7 190 aaKnown RBP11.46□□□□□ -0.57
RPGR-203ENST00000378505 MRPL9Q9BYD2 267 aaKnown RBP11.46□□□□□ -0.57
RPGR-203ENST00000378505 CLCA2Q9UQC9 943 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 COQ4Q9Y3A0 265 aa11.46□□□□□ -0.57
RPGR-203ENST00000378505 ATXN2Q99700 1313 aaKnown RBP11.46□□□□□ -0.57
RPGR-203ENST00000378505 KDM4FA0A1W2PPD8 638 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 TBKBP1A7MCY6 615 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 AVILO75366 819 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 CCDC166P0CW27 439 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 RPL9P32969 192 aaKnown RBP11.46□□□□□ -0.58
RPGR-203ENST00000378505 CDKN2BP42772 138 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 GABRB2P47870 512 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 ANXA11P50995 505 aaKnown RBP11.46□□□□□ -0.58
RPGR-203ENST00000378505 MRPS22P82650 360 aaKnown RBP11.46□□□□□ -0.58
RPGR-203ENST00000378505 ENPEPQ07075 957 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 TRAF2Q12933 501 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 CAMK2GQ13555 558 aaPredicted RBP11.46□□□□□ -0.58
RPGR-203ENST00000378505 CXCL17Q6UXB2 119 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 B4GALNT2Q8NHY0 566 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 SLC44A1Q8WWI5 657 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 P2RY11Q96G91 374 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 DUSP16Q9BY84 665 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 RNPEPQ9H4A4 650 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 PIF1Q9H611 641 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 SIX2Q9NPC8 291 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 PCDHGC3Q9UN70 934 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 GNG14A0A1W2PPG7 69 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 ADAMTS3O15072 1205 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 SPTLC1O15269 473 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 TSPAN3O60637 253 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 CILPO75339 1184 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 GUCA1CO95843 209 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 LBPP18428 481 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 CCT8P50990 548 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 IL2P60568 153 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 MRPS15P82914 257 aaKnown RBP11.46□□□□□ -0.58
RPGR-203ENST00000378505 TRIM60Q495X7 471 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 DEPDC1Q5TB30 811 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 MILR1Q7Z6M3 343 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 STK40Q8N2I9 435 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 TRAPPC9Q96Q05 1148 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 FBXO5Q9UKT4 447 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 RAP2CQ9Y3L5 183 aa11.46□□□□□ -0.58
RPGR-203ENST00000378505 KNDC1Q76NI1 1749 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 RGSL1A5PLK6 1076 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 CCDC154A6NI56 674 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 KATNA1O75449 491 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 CPSF4O95639 269 aaKnown RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 IFNA14P01570 189 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 KRT8P05787 483 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 SERPINA6P08185 405 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 PTDSS1P48651 473 aaKnown RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 CRYBB1P53674 252 aaPredicted RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 TP53BP2Q13625 1128 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 SLC25A52Q3SY17 297 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 OTUD3Q5T2D3 398 aaPredicted RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 PACS1Q6VY07 963 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 ZNF572Q7Z3I7 529 aaPredicted RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 TOP6BLQ8N6T0 577 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 CLEC4DQ8WXI8 215 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 ZFRQ96KR1 1074 aaKnown RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 TMCC3Q9ULS5 477 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 DYRK1BQ9Y463 629 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 MED1Q15648 1581 aaPredicted RBP11.45□□□□□ -0.58
RPGR-203ENST00000378505 ITGB6P18564 788 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 XYLT1Q86Y38 959 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 GPSM1Q86YR5 675 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 ATG16L2Q8NAA4 619 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 HGH1Q9BTY7 390 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 EPS8L2Q9H6S3 715 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 ALG9Q9H6U8 611 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 CATSPERZQ9NTU4 200 aa11.45□□□□□ -0.58
RPGR-203ENST00000378505 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms