RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 MAP1SQ66K74 1059 aaPredicted RBP16.16■□□□□ 0.18
CKAP4-201ENST00000378026 SPNS2Q8IVW8 549 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 LRRC71Q8N4P6 559 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 FAM151AQ8WW52 585 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 HTR3CQ8WXA8 447 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 GPRASP2Q96D09 838 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 NAA50Q9GZZ1 169 aaKnown RBP16.16■□□□□ 0.18
CKAP4-201ENST00000378026 TRNAU1APQ9NX07 287 aaKnown RBP16.16■□□□□ 0.18
CKAP4-201ENST00000378026 IGSF9Q9P2J2 1179 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 SLC39A10Q9ULF5 831 aa16.16■□□□□ 0.18
CKAP4-201ENST00000378026 FUOMA2VDF0 154 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 FAM149AA5PLN7 773 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 TCAF2A6NFQ2 919 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 K7EPI3 171 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 SOCS2O14508 198 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 PHGDHO43175 533 aaKnown RBP16.15■□□□□ 0.18
CKAP4-201ENST00000378026 CBFA2T3O75081 653 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 POLBP06746 335 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 UGT1A6P19224 532 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 PFKPQ01813 784 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 GSTM4Q03013 218 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 FGD3Q5JSP0 725 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 TREML2Q5T2D2 321 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 STEAP4Q687X5 459 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 RNF149Q8NC42 400 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 SLC35B4Q969S0 331 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 ATG4CQ96DT6 458 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 MRPL4Q9BYD3 311 aaKnown RBP16.15■□□□□ 0.18
CKAP4-201ENST00000378026 TSPAN16Q9UKR8 245 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 GPR25O00155 361 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 NRP1O14786 923 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 SERPINB7O75635 380 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 FUCA1P04066 466 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 GJB1P08034 283 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 CYP3A5P20815 502 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 HALP42357 657 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 OXCT1P55809 520 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 LRRC8EQ6NSJ5 796 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 CHST15Q7LFX5 561 aaPredicted RBP16.15■□□□□ 0.18
CKAP4-201ENST00000378026 DDHD1Q8NEL9 900 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 OR52K1Q8NGK4 314 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 URGCPQ8TCY9 931 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 VPS33BQ9H267 617 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 ZBTB26Q9HCK0 441 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 DTLQ9NZJ0 730 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 RAP2CQ9Y3L5 183 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 ZNF831Q5JPB2 1677 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 AHDC1Q5TGY3 1603 aaPredicted RBP16.15■□□□□ 0.18
CKAP4-201ENST00000378026 C9IYK1 514 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 B4GALT5O43286 388 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 UGT1A1P22309 533 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 UGT1A4P22310 534 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 HMOX2P30519 316 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 UGT1A3P35503 534 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 UGT1A5P35504 534 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 CD300CQ08708 224 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 FSTL1Q12841 308 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 TRIM25Q14258 630 aaKnown RBP16.15■□□□□ 0.18
CKAP4-201ENST00000378026 HMBOX1Q6NT76 420 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 TMEM26Q6ZUK4 368 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 SGF29Q96ES7 293 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 CNDP1Q96KN2 507 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 OMDQ99983 421 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 ACE2Q9BYF1 805 aaPredicted RBP16.15■□□□□ 0.18
CKAP4-201ENST00000378026 SIX4Q9UIU6 781 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 CPSF3Q9UKF6 684 aaKnown RBP16.15■□□□□ 0.18
CKAP4-201ENST00000378026 WDR37Q9Y2I8 494 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 SQORQ9Y6N5 450 aa16.15■□□□□ 0.18
CKAP4-201ENST00000378026 MSCO60682 206 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 MT-CO1P00395 513 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 ASNSP08243 561 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 NFICP08651 508 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 SPRP35270 261 aaPredicted RBP16.14■□□□□ 0.17
CKAP4-201ENST00000378026 NUMBP49757 651 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 CREB5Q02930 508 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 DGKDQ16760 1214 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 SLCO4A1Q96BD0 722 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 PLEKHA8Q96JA3 519 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 APOL2Q9BQE5 337 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 SLC39A3Q9BRY0 314 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 RMI1Q9H9A7 625 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 CXorf21Q9HAI6 301 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 CCDC167Q9P0B6 97 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 SLC8A2Q9UPR5 921 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 AURKCQ9UQB9 309 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 SYNJ2BP-COX16A0A087WUM0 186 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 PRKCBP05771 671 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 GOT1P17174 413 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 PHEXP78562 749 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 BTG3Q14201 252 aaPredicted RBP16.14■□□□□ 0.17
CKAP4-201ENST00000378026 GRTP1Q5TC63 336 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 NANOGP8Q6NSW7 305 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 CENPSQ8N2Z9 138 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 RBBP8Q99708 897 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 OXSMQ9NWU1 459 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 GGA3Q9NZ52 723 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 COX16Q9P0S2 106 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 ZNHIT2Q9UHR6 403 aa16.14■□□□□ 0.17
CKAP4-201ENST00000378026 TMEM114B3SHH9 223 aa16.13■□□□□ 0.17
CKAP4-201ENST00000378026 ADAM23O75077 832 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms