RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 PSMD3O43242 534 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 PLIN3O60664 434 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 HNRNPCL1O60812 293 aaKnown RBP20.61■□□□□ 0.89
VSX1-202ENST00000376709 DNAJC6O75061 913 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 SNNO75324 88 aaPredicted RBP20.61■□□□□ 0.89
VSX1-202ENST00000376709 GNRH1P01148 92 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 GRK4P32298 578 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 FRG1Q14331 258 aaKnown RBP20.61■□□□□ 0.89
VSX1-202ENST00000376709 DBN1Q16643 649 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 MON1AQ86VX9 555 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 NUP93Q8N1F7 819 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 DCLK2Q8N568 766 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 SPATA22Q8NHS9 363 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 SLC39A8Q9C0K1 460 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 SNX15Q9NRS6 342 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 THAP1Q9NVV9 213 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 ADAM28Q9UKQ2 775 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 SOX13Q9UN79 622 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 E9PAM4 449 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 MAFKO60675 156 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 SERPINB8P50452 374 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 LIMK2P53671 638 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 RPL10AP62906 217 aaKnown RBP20.61■□□□□ 0.89
VSX1-202ENST00000376709 TEDDM1Q5T9Z0 273 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 CMC1Q7Z7K0 106 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 FUBP3Q96I24 572 aaKnown RBP eCLIP20.61■□□□□ 0.89
VSX1-202ENST00000376709 FBXO44Q9H4M3 255 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 NDFIP2Q9NV92 336 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 OSER1Q9NX31 292 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 HS3ST4Q9Y661 456 aa20.61■□□□□ 0.89
VSX1-202ENST00000376709 KCNA4P22459 653 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 GPR15P49685 360 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 VEGFBP49765 207 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 FAM189BP81408 668 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 INSCQ1MX18 579 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 VARS2Q5ST30 1063 aaKnown RBP20.6■□□□□ 0.89
VSX1-202ENST00000376709 FSTL4Q6MZW2 842 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 LRRC8DQ7L1W4 858 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 AGAP11Q8TF27 550 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 ZNF296Q8WUU4 475 aaPredicted RBP20.6■□□□□ 0.89
VSX1-202ENST00000376709 AZIN2Q96A70 460 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 TUBB6Q9BUF5 446 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 TBC1D10AQ9BXI6 508 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 C20orf27Q9GZN8 174 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 MPP6Q9NZW5 540 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 LNPEPQ9UIQ6 1025 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 SCML2Q9UQR0 700 aa20.6■□□□□ 0.89
VSX1-202ENST00000376709 E2F8A0AVK6 867 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 KCNU1A8MYU2 1149 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 MATN3O15232 486 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 ANXA9O76027 345 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 NEBLO76041 1014 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 MT-CYBP00156 380 aaPredicted RBP20.59■□□□□ 0.89
VSX1-202ENST00000376709 GSRP00390 522 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 F7P08709 466 aaPredicted RBP20.59■□□□□ 0.89
VSX1-202ENST00000376709 PTPN4P29074 926 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 IPMKQ8NFU5 416 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 TBL1YQ9BQ87 522 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 CCDC78A2IDD5 438 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 TRAFD1O14545 582 aaPredicted RBP20.59■□□□□ 0.89
VSX1-202ENST00000376709 CACNG3O60359 315 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 DNAJB2P25686 324 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 NMBRP28336 390 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 APLP1P51693 650 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 MPP3Q13368 585 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 CTXN3Q4LDR2 81 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 MBLAC2Q68D91 279 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 TIGD7Q6NT04 549 aaPredicted RBP20.59■□□□□ 0.89
VSX1-202ENST00000376709 ALYREFQ86V81 257 aaKnown RBP20.59■□□□□ 0.89
VSX1-202ENST00000376709 ABI1Q8IZP0 508 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 RTL3Q8N8U3 475 aaKnown RBP20.59■□□□□ 0.89
VSX1-202ENST00000376709 PRR11Q96HE9 360 aaPredicted RBP20.59■□□□□ 0.89
VSX1-202ENST00000376709 ZNF419Q96HQ0 510 aaPredicted RBP20.59■□□□□ 0.89
VSX1-202ENST00000376709 IL12RB2Q99665 862 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 FTHL17Q9BXU8 183 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 WWP1Q9H0M0 922 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 GLOD4Q9HC38 313 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 IARS2Q9NSE4 1012 aaKnown RBP20.59■□□□□ 0.89
VSX1-202ENST00000376709 PHF24Q9UPV7 400 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 TLR6Q9Y2C9 796 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 HBS1LQ9Y450 684 aaKnown RBP20.59■□□□□ 0.89
VSX1-202ENST00000376709 PCDHB5Q9Y5E4 795 aa20.59■□□□□ 0.89
VSX1-202ENST00000376709 FCHO1O14526 889 aa20.58■□□□□ 0.89
VSX1-202ENST00000376709 FKTNO75072 461 aa20.58■□□□□ 0.89
VSX1-202ENST00000376709 AQP5P55064 265 aa20.58■□□□□ 0.89
VSX1-202ENST00000376709 PCLAFQ15004 111 aa20.58■□□□□ 0.89
VSX1-202ENST00000376709 PREPLQ4J6C6 727 aaPredicted RBP20.58■□□□□ 0.89
VSX1-202ENST00000376709 TTC7BQ86TV6 843 aa20.58■□□□□ 0.89
VSX1-202ENST00000376709 LONP2Q86WA8 852 aa20.58■□□□□ 0.89
VSX1-202ENST00000376709 SH3TC2Q8TF17 1288 aa20.58■□□□□ 0.89
VSX1-202ENST00000376709 C8orf48Q96LL4 319 aa20.58■□□□□ 0.89
VSX1-202ENST00000376709 FCRL5Q96RD9 977 aa20.58■□□□□ 0.89
VSX1-202ENST00000376709 ARL8BQ9NVJ2 186 aa20.58■□□□□ 0.89
VSX1-202ENST00000376709 TMEM216Q9P0N5 145 aa20.58■□□□□ 0.89
VSX1-202ENST00000376709 L3MBTL1Q9Y468 752 aa20.58■□□□□ 0.89
VSX1-202ENST00000376709 NYNRINQ9P2P1 1898 aaKnown RBP20.58■□□□□ 0.89
VSX1-202ENST00000376709 GOLGA8TH3BQL2 631 aa20.58■□□□□ 0.88
VSX1-202ENST00000376709 SYN3O14994 580 aa20.58■□□□□ 0.88
VSX1-202ENST00000376709 TIMM44O43615 452 aa20.58■□□□□ 0.88
VSX1-202ENST00000376709 PROCP04070 461 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms