RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	NR1D1	P20393	614 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	TIE1	P35590	1138 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	NAPRT	Q6XQN6	538 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	PDZD8	Q8NEN9	1154 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	UCMA	Q8WVF2	138 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	SPATA17	Q96L03	361 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	FAM50B	Q9Y247	325 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	INVS	Q9Y283	1065 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	TRBV23OR9-2	A0A075B6M9	112 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	INPP4B	O15327	924 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	MAP3K13	O43283	966 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	FBXO48	Q5FWF7	155 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	PTRHD1	Q6GMV3	140 aa	Known RBP	13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	NAPEPLD	Q6IQ20	393 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	BBS12	Q6ZW61	710 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	RGL4	Q8IZJ4	473 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	MMGT1	Q8N4V1	131 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	TDP1	Q9NUW8	608 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	ARHGEF38	Q9NXL2	777 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	DTL	Q9NZJ0	730 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	NME7	Q9Y5B8	376 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	HS3ST4	Q9Y661	456 aa		13.81	□□□□□ -0.2
DDR1-225	ENST00000376568	TRIM49D1	C9J1S8	452 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	PLK1	P53350	603 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	AMPD2	Q01433	879 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	TRIM71	Q2Q1W2	868 aa	Known RBP	13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	FBXL19	Q6PCT2	694 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568		Q7L0L9	218 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	ANKRD33	Q7Z3H0	272 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	CALR3	Q96L12	384 aa	Known RBP	13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	LIMD1	Q9UGP4	676 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	PKP3	Q9Y446	797 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	LAMA3	Q16787	3333 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	PAM	P19021	973 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	GLDC	P23378	1020 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	FSHR	P23945	695 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	SOX11	P35716	441 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	PXN	P49023	591 aa	Predicted RBP	13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	FNTA	P49354	379 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	STK19	P49842	368 aa	Predicted RBP	13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	SLC10A7	Q0GE19	358 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	SLC45A4	Q5BKX6	768 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	CEP128	Q6ZU80	1094 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	STRADA	Q7RTN6	431 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	LRRC8C	Q8TDW0	803 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	WRAP53	Q9BUR4	548 aa	Known RBP	13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	CACNA1H	O95180	2353 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	ZNF197	O14709	1029 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	PFKM	P08237	780 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	PCK1	P35558	622 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	CASP2	P42575	452 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	PFKP	Q01813	784 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	BCL2L1	Q07817	233 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	CTBP1	Q13363	440 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	RCN2	Q14257	317 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	CNGA3	Q16281	694 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	RNF38	Q9H0F5	515 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	GTSE1	Q9NYZ3	720 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	FBXW11	Q9UKB1	542 aa		13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.8	□□□□□ -0.2
DDR1-225	ENST00000376568	POLB	P06746	335 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	L1CAM	P32004	1257 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	PTPRCAP	Q14761	206 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	RHBDF2	Q6PJF5	856 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	PIK3R5	Q8WYR1	880 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	DCUN1D1	Q96GG9	259 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	SLC17A6	Q9P2U8	582 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	SIPA1L1	O43166	1804 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568		A0A087WUV0	522 aa	Predicted RBP	13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	SERPIND1	P05546	499 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	ASGR2	P07307	311 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	SLC8A1	P32418	973 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	PSEN1	P49768	467 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	ACOX1	Q15067	660 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	SGO1	Q5FBB7	561 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	CAMK1D	Q8IU85	385 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	MAML1	Q92585	1016 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	EXOC4	Q96A65	974 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	NDN	Q99608	321 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	CAPS2	Q9BXY5	557 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	UBXN6	Q9BZV1	441 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	RRN3	Q9NYV6	651 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	SCN4A	P35499	1836 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	CFAP69	A5D8W1	941 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568		K7ERQ8	282 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	PFDN6	O15212	129 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	ANXA9	O76027	345 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	SHBG	P04278	402 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	ACADM	P11310	421 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	CSK	P41240	450 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	ZRSR2	Q15696	482 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	POLN	Q7Z5Q5	900 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	UNC5B	Q8IZJ1	945 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	TMEM175	Q9BSA9	504 aa		13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	C12orf65	Q9H3J6	166 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-225	ENST00000376568	PHGDH	O43175	533 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-225	ENST00000376568	KRT38	O76015	456 aa		13.78	□□□□□ -0.2

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