RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 RBM22Q9NW64 420 aaKnown RBP eCLIP18.04■□□□□ 0.489e-7■■■■□ 20.4
CTTN-203ENST00000376561 SYBUQ9NX95 663 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 A0A1W2PPM1 405 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 CXorf49A8MYA2 514 aaPredicted RBP18.04■□□□□ 0.48
CTTN-203ENST00000376561 HLA-DQB2P05538 268 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 OR1E1P30953 314 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 MPP2Q14168 576 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 RFWD3Q6PCD5 774 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 PSRC1Q6PGN9 363 aaPredicted RBP18.04■□□□□ 0.48
CTTN-203ENST00000376561 ITIH5Q86UX2 942 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 DENND1CQ8IV53 801 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 CTAGE3PQ8IX95 158 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.04■□□□□ 0.48
CTTN-203ENST00000376561 PPM1NQ8N819 430 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 DNAAF3Q8N9W5 541 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 MZB1Q8WU39 189 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 FATE1Q969F0 183 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 ZNF334Q9HCZ1 680 aaPredicted RBP18.04■□□□□ 0.48
CTTN-203ENST00000376561 SMYD2Q9NRG4 433 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 MOCS1Q9NZB8 636 aa18.04■□□□□ 0.48
CTTN-203ENST00000376561 AAR2Q9Y312 384 aaKnown RBP18.04■□□□□ 0.48
CTTN-203ENST00000376561 PSMD3O43242 534 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 RAMP2O60895 175 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 F11P03951 625 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 KLKB1P03952 638 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 PGAM1P18669 254 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 MAPKAPK2P49137 400 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 HNRNPDQ14103 355 aaKnown RBP18.03■□□□□ 0.48
CTTN-203ENST00000376561 POLD3Q15054 466 aaPredicted RBP18.03■□□□□ 0.48
CTTN-203ENST00000376561 GLIPR1L2Q4G1C9 344 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 CYS1Q717R9 158 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 TMC7Q7Z402 723 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 SLC26A11Q86WA9 606 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 HERC6Q8IVU3 1022 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 SPATA22Q8NHS9 363 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 AZIN2Q96A70 460 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 SMC6Q96SB8 1091 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 RAD9AQ99638 391 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 KLF16Q9BXK1 252 aaPredicted RBP18.03■□□□□ 0.48
CTTN-203ENST00000376561 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.03■□□□□ 0.48
CTTN-203ENST00000376561 FAM159BA6NKW6 160 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 J3KR12 359 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 CXCL14O95715 111 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 CORO1AP31146 461 aaKnown RBP18.03■□□□□ 0.48
CTTN-203ENST00000376561 IFNAR2P48551 515 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 ZSCAN26Q16670 478 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 PARP15Q460N3 678 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 NAPEPLDQ6IQ20 393 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 CFAP52Q8N1V2 620 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 ANKRD42Q8N9B4 389 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 SP7Q8TDD2 431 aaPredicted RBP18.03■□□□□ 0.48
CTTN-203ENST00000376561 APOL2Q9BQE5 337 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 MCOLN1Q9GZU1 580 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 SP110Q9HB58 689 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 BFARQ9NZS9 450 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 OBSL1O75147 1896 aa18.03■□□□□ 0.48
CTTN-203ENST00000376561 IQANK1A0A1B0GTG1 560 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 GMNCA6NCL1 334 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 ANXA9O76027 345 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 NEBLO76041 1014 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 ALDH1A2O94788 518 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 MT-CYBP00156 380 aaPredicted RBP18.02■□□□□ 0.48
CTTN-203ENST00000376561 RENBPP51606 427 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 YBEYP58557 167 aaPredicted RBP18.02■□□□□ 0.48
CTTN-203ENST00000376561 ZNF354CQ86Y25 554 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 C4orf33Q8N1A6 199 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 MGARPQ8TDB4 240 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 IL21Q9HBE4 155 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 SAMD15Q9P1V8 674 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 ZNF180Q9UJW8 692 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 SLC4A7Q9Y6M7 1214 aa18.02■□□□□ 0.48
CTTN-203ENST00000376561 LCHNA4D1U4 455 aa18.02■□□□□ 0.47
CTTN-203ENST00000376561 SPAG7O75391 227 aa18.02■□□□□ 0.47
CTTN-203ENST00000376561 CRYMQ14894 314 aa18.02■□□□□ 0.47
CTTN-203ENST00000376561 LRRC14Q15048 493 aa18.02■□□□□ 0.47
CTTN-203ENST00000376561 LILRA6Q6PI73 481 aa18.02■□□□□ 0.47
CTTN-203ENST00000376561 LINC00523Q86TU6 105 aa18.02■□□□□ 0.47
CTTN-203ENST00000376561 C7orf61Q8IZ16 206 aa18.02■□□□□ 0.47
CTTN-203ENST00000376561 PPP1R2P1Q96PQ5 205 aa18.02■□□□□ 0.47
CTTN-203ENST00000376561 ASB3Q9Y575 518 aa18.02■□□□□ 0.47
CTTN-203ENST00000376561 ZFP37Q9Y6Q3 630 aaPredicted RBP18.02■□□□□ 0.47
CTTN-203ENST00000376561 FAM47DPA6NHR8 397 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 PRPF4O43172 522 aaKnown RBP eCLIP18.01■□□□□ 0.471e-6■■■■□ 20.8
CTTN-203ENST00000376561 TLL1O43897 1013 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 FAM155BO75949 473 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 IRF1P10914 325 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 KRT4P19013 534 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 CDH17Q12864 832 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 SERINC3Q13530 473 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 PABPC1LQ4VXU2 614 aaKnown RBP18.01■□□□□ 0.47
CTTN-203ENST00000376561 UNC5BQ8IZJ1 945 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 HERVK_113Q902F9 699 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 TTC17Q96AE7 1141 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 PABPC5Q96DU9 382 aaKnown RBP18.01■□□□□ 0.47
CTTN-203ENST00000376561 KLHL5Q96PQ7 755 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 CCDC134Q9H6E4 229 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 RETREG1Q9H6L5 497 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 NKIRAS1Q9NYS0 192 aa18.01■□□□□ 0.47
CTTN-203ENST00000376561 AP3B1O00203 1094 aa18■□□□□ 0.47
CTTN-203ENST00000376561 NDUFAB1O14561 156 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms