RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 TARM1B6A8C7 271 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 APOA4P06727 396 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 DNAJB2P25686 324 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 TKTL1P51854 596 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 ZNF33AQ06730 810 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 ZBTB17Q13105 803 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 ITGA7Q13683 1181 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 BSPRYQ5W0U4 402 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 GALNT15Q8N3T1 639 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 ACVR1CQ8NER5 493 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 PYDC1Q8WXC3 89 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 MFSD3Q96ES6 412 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 PPP1R10Q96QC0 940 aaKnown RBP10.88□□□□□ -0.67
ABCF1-202ENST00000376545 GPR22Q99680 433 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 KIFC1Q9BW19 673 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 FAM49AQ9H0Q0 323 aaPredicted RBP10.88□□□□□ -0.67
ABCF1-202ENST00000376545 ARHGAP26Q9UNA1 814 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 MYLKQ15746 1914 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 SHROOM3Q8TF72 1996 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 HHLA1C9JL84 531 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 SMIM24O75264 130 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 NME3Q13232 169 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 SFT2D3Q587I9 215 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 CERCAMQ5T4B2 595 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 ZYG11AQ6WRX3 759 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 KCNMB4Q86W47 210 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 CNTN4Q8IWV2 1026 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 DEFB107AQ8IZN7 70 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 ZC3H15Q8WU90 426 aaKnown RBP10.88□□□□□ -0.67
ABCF1-202ENST00000376545 TEKT5Q96M29 485 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 TSGA13Q96PP4 275 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 TUBGCP5Q96RT8 1024 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 GATA5Q9BWX5 397 aaPredicted RBP10.88□□□□□ -0.67
ABCF1-202ENST00000376545 EBF3Q9H4W6 596 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 PIDD1Q9HB75 910 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 LRRC4Q9HBW1 653 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 CRTAC1Q9NQ79 661 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 CNGB3Q9NQW8 809 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 SPATS2LQ9NUQ6 558 aaKnown RBP10.88□□□□□ -0.67
ABCF1-202ENST00000376545 RRN3Q9NYV6 651 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 SSX2IPQ9Y2D8 614 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 IPPQ9Y573 584 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 PATJQ8NI35 1801 aa10.88□□□□□ -0.67
ABCF1-202ENST00000376545 YJEFN3A6XGL0 299 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 AP3B1O00203 1094 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 HAS3O00219 553 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 PTGESO14684 152 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 DCXO43602 365 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 RNASEH1O60930 286 aaKnown RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 USP12O75317 370 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 BAG2O95816 211 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 ADSLP30566 484 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 PEX19P40855 299 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 GTF2A2P52657 109 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 ASPHQ12797 758 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 MPP3Q13368 585 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 DLG2Q15700 870 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 HSP90AA5PQ58FG0 334 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 PM20D1Q6GTS8 502 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 HPS6Q86YV9 775 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 TDRD5Q8NAT2 981 aaKnown RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 ZMIZ2Q8NF64 920 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 OR52B2Q96RD2 323 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 TINF2Q9BSI4 451 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 KLHL4Q9C0H6 718 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 CAB39LQ9H9S4 337 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 NSMCE4AQ9NXX6 385 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 PRPF19Q9UMS4 504 aaKnown RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 RAP2CQ9Y3L5 183 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 TRIP12Q14669 1992 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 ENO4A6NNW6 628 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 AP1G1O43747 822 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 HSPA4LO95757 839 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 LTFP02788 710 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 CAPNS1P04632 268 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 UQCRBP14927 111 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 NCF2P19878 526 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 POLD2P49005 469 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 CXCR3P49682 368 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 PAPOLAP51003 745 aaKnown RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 TPI1P60174 286 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 NSUN2Q08J23 767 aaKnown RBP eCLIP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 TBL3Q12788 808 aaKnown RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 IRF5Q13568 498 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 SIX6OS1Q8N1H7 587 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 SPDYE1Q8NFV5 336 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 NCSTNQ92542 709 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 VPS39Q96JC1 886 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 MS4A4AQ96JQ5 239 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 SMOQ99835 787 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 ULBP1Q9BZM6 244 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 VCX3BQ9H321 246 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 CHRAC1Q9NRG0 131 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 PAPOLBQ9NRJ5 636 aaKnown RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 MID2Q9UJV3 735 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 GNEQ9Y223 722 aaKnown RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 PIN4Q9Y237 131 aaKnown RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 GINS2Q9Y248 185 aa10.87□□□□□ -0.67
ABCF1-202ENST00000376545 EME2A4GXA9 379 aaPredicted RBP10.87□□□□□ -0.67
ABCF1-202ENST00000376545 GRID2O43424 1007 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms