RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.43■■□□□ 1.34
HLA-C-202ENST00000376237 RIOK3O14730 519 aaKnown RBP23.43■■□□□ 1.34
HLA-C-202ENST00000376237 MATN3O15232 486 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 TULP3O75386 442 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 ECEL1O95672 775 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 GAS8O95995 478 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 PABPC1P11940 636 aaKnown RBP23.43■■□□□ 1.34
HLA-C-202ENST00000376237 RBL1P28749 1068 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 CD70P32970 193 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 PFKPQ01813 784 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 GAB4Q2WGN9 574 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 PLEKHG6Q3KR16 790 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 SYDE1Q6ZW31 735 aaPredicted RBP23.43■■□□□ 1.34
HLA-C-202ENST00000376237 GSTA5Q7RTV2 222 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 KIAA0907Q7Z7F0 614 aaPredicted RBP23.43■■□□□ 1.34
HLA-C-202ENST00000376237 NSMCE1Q8WV22 266 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 ATXN2LQ8WWM7 1075 aaKnown RBP23.43■■□□□ 1.34
HLA-C-202ENST00000376237 ZNF599Q96NL3 588 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 USP29Q9HBJ7 922 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 AMACRQ9UHK6 382 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 GGA2Q9UJY4 613 aa23.43■■□□□ 1.34
HLA-C-202ENST00000376237 SGK1O00141 431 aa23.42■■□□□ 1.34
HLA-C-202ENST00000376237 KCNN4O15554 427 aa23.42■■□□□ 1.34
HLA-C-202ENST00000376237 PRAMEF11O60813 436 aa23.42■■□□□ 1.34
HLA-C-202ENST00000376237 CISD3P0C7P0 127 aa23.42■■□□□ 1.34
HLA-C-202ENST00000376237 DR1Q01658 176 aa23.42■■□□□ 1.34
HLA-C-202ENST00000376237 TDGQ13569 410 aa23.42■■□□□ 1.34
HLA-C-202ENST00000376237 GLE1Q53GS7 698 aaKnown RBP23.42■■□□□ 1.34
HLA-C-202ENST00000376237 CCDC70Q6NSX1 233 aa23.42■■□□□ 1.34
HLA-C-202ENST00000376237 AHI1Q8N157 1196 aa23.42■■□□□ 1.34
HLA-C-202ENST00000376237 ALLCQ8N6M5 410 aa23.42■■□□□ 1.34
HLA-C-202ENST00000376237 WFIKKN2Q8TEU8 576 aa23.42■■□□□ 1.34
HLA-C-202ENST00000376237 VAT1Q99536 393 aa23.42■■□□□ 1.34
HLA-C-202ENST00000376237 EFCAB8A8MWE9 144 aa23.41■■□□□ 1.34
HLA-C-202ENST00000376237 STK10O94804 968 aaKnown RBP23.41■■□□□ 1.34
HLA-C-202ENST00000376237 GEMIN4P57678 1058 aaKnown RBP23.41■■□□□ 1.34
HLA-C-202ENST00000376237 SULT2A1Q06520 285 aa23.41■■□□□ 1.34
HLA-C-202ENST00000376237 HNRNPDQ14103 355 aaKnown RBP23.41■■□□□ 1.34
HLA-C-202ENST00000376237 ASTLQ6HA08 431 aaPredicted RBP23.41■■□□□ 1.34
HLA-C-202ENST00000376237 ARHGAP36Q6ZRI8 547 aa23.41■■□□□ 1.34
HLA-C-202ENST00000376237 RTP4Q96DX8 246 aa23.41■■□□□ 1.34
HLA-C-202ENST00000376237 EYSQ5T1H1 3165 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 FAM187AA6NFU0 413 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 CBX4O00257 560 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 ASGR2P07307 311 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 VAV1P15498 845 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 RENBPP51606 427 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 SLC20A2Q08357 652 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 RFTN1Q14699 578 aaPredicted RBP23.4■■□□□ 1.34
HLA-C-202ENST00000376237 PITRM1Q5JRX3 1037 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 TMCO4Q5TGY1 634 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 GRAMD4Q6IC98 578 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 RETSATQ6NUM9 610 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 C8orf74Q6P047 294 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 B4GALNT4Q76KP1 1039 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 C12orf40Q86WS4 652 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 APCDD1Q8J025 514 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 CCDC89Q8N998 374 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 FAM71DQ8N9W8 422 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 NOA1Q8NC60 698 aaKnown RBP23.4■■□□□ 1.34
HLA-C-202ENST00000376237 MAML1Q92585 1016 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 EXOC4Q96A65 974 aa23.4■■□□□ 1.34
HLA-C-202ENST00000376237 C8orf33Q9H7E9 229 aaPredicted RBP23.4■■□□□ 1.34
HLA-C-202ENST00000376237 C5orf42Q9H799 3197 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 C5orf60A6NFR6 353 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 J3KR12 359 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 ZMPSTE24O75844 475 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 CCNB1P14635 433 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 ACTN2P35609 894 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 PTGIRP43119 386 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 IFI35P80217 286 aaPredicted RBP23.39■■□□□ 1.34
HLA-C-202ENST00000376237 ZP2Q05996 745 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 NUDT18Q6ZVK8 323 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 SUGP1Q8IWZ8 645 aaKnown RBP23.39■■□□□ 1.34
HLA-C-202ENST00000376237 TTC8Q8TAM2 541 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 CCHCR1Q8TD31 782 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 C10orf88Q9H8K7 445 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 PDFQ9HBH1 243 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 SLC2A4RGQ9NR83 387 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 HAUS2Q9NVX0 235 aa23.39■■□□□ 1.34
HLA-C-202ENST00000376237 INTS6Q9UL03 887 aaKnown RBP23.39■■□□□ 1.34
HLA-C-202ENST00000376237 KCNK1O00180 336 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 TIMM44O43615 452 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 SRFP11831 508 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 GLULP15104 373 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 OPRD1P41143 372 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 CLCN6P51797 869 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 PPP1R7Q15435 360 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 P3H1Q32P28 736 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 INO80DQ53TQ3 878 aaPredicted RBP23.38■■□□□ 1.33
HLA-C-202ENST00000376237 MARC1Q5VT66 337 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 C4orf22Q6V702 233 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 METTL3Q86U44 580 aaKnown RBP23.38■■□□□ 1.33
HLA-C-202ENST00000376237 LRRN4Q8WUT4 740 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 CASKIN2Q8WXE0 1202 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 PNKPQ96T60 521 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 UBA2Q9UBT2 640 aaPredicted RBP23.38■■□□□ 1.33
HLA-C-202ENST00000376237 VPS51Q9UID3 782 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 TRHDEQ9UKU6 1024 aa23.38■■□□□ 1.33
HLA-C-202ENST00000376237 SPTBN5Q9NRC6 3674 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms