RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 LRRC63Q05C16 580 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 SRSF6Q13247 344 aaKnown RBP11.35□□□□□ -0.59
DDX39B-201ENST00000376177 EIF4HQ15056 248 aaKnown RBP11.35□□□□□ -0.59
DDX39B-201ENST00000376177 HIST2H2BCQ6DN03 193 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 CHST9Q7L1S5 443 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 NOA1Q8NC60 698 aaKnown RBP11.35□□□□□ -0.59
DDX39B-201ENST00000376177 WFDC5Q8TCV5 224 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 GANCQ8TET4 914 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 DDI1Q8WTU0 396 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 SYN2Q92777 582 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-201ENST00000376177 CCDC127Q96BQ5 260 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 CCDC42Q96M95 316 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 OSBPL2Q9H1P3 480 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 NEUROG2Q9H2A3 272 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 PABPC3Q9H361 631 aaKnown RBP11.35□□□□□ -0.59
DDX39B-201ENST00000376177 FBXO44Q9H4M3 255 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 NHEJ1Q9H9Q4 299 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-201ENST00000376177 FBXL12Q9NXK8 326 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 NAGPAQ9UK23 515 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 SNX12Q9UMY4 172 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 HYOU1Q9Y4L1 999 aa11.35□□□□□ -0.59
DDX39B-201ENST00000376177 HEMK1Q9Y5R4 338 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-201ENST00000376177 ATP8B3O60423 1300 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 AHCTF1Q8WYP5 2266 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 A0A087WUV0 522 aaPredicted RBP11.34□□□□□ -0.59
DDX39B-201ENST00000376177 A0A1B0GVM2 712 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 SSU72P8A0A1W2PR75 194 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 GOLGA6BA6NDN3 693 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 LRRIQ3A6PVS8 624 aaPredicted RBP11.34□□□□□ -0.59
DDX39B-201ENST00000376177 TLR4O00206 839 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 MID1O15344 667 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 PJA2O43164 708 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 KLRC4O43908 158 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 IDEP14735 1019 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 TNNI1P19237 187 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 USP8P40818 1118 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 PAFAH1B1P43034 410 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 ARRB1P49407 418 aaPredicted RBP11.34□□□□□ -0.59
DDX39B-201ENST00000376177 CASP4P49662 377 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 PPP2CBP62714 309 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 PPP2CAP67775 309 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 EFEMP1Q12805 493 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 WDR59Q6PJI9 974 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 CLEC20AQ6ZU45 233 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 SLC25A45Q8N413 288 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 AENQ8WTP8 325 aaKnown RBP11.34□□□□□ -0.59
DDX39B-201ENST00000376177 MYO19Q96H55 970 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 SERAC1Q96JX3 654 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 BLZF1Q9H2G9 400 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 ABCB8Q9NUT2 735 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 UCKL1Q9NWZ5 548 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 HSPBP1Q9NZL4 362 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 SATB2Q9UPW6 733 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 CA5BQ9Y2D0 317 aa11.34□□□□□ -0.59
DDX39B-201ENST00000376177 GRID2IPA4D2P6 1211 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 NTRK1P04629 796 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 FAM163BP0C2L3 166 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 ITGB6P18564 788 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 CHKAP35790 457 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 MTIF2P46199 727 aaKnown RBP11.33□□□□□ -0.6
DDX39B-201ENST00000376177 RXRGP48443 463 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 LSSP48449 732 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 ERVPABLB-1P60509 514 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 SKOR1P84550 965 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 TTC31Q49AM3 519 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-201ENST00000376177 C3orf38Q5JPI3 329 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 ZNF776Q68DI1 518 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-201ENST00000376177 KLHDC10Q6PID8 442 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 PLEKHO2Q8TD55 490 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 CAVIN3Q969G5 261 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 RUFY1Q96T51 708 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 CHP1Q99653 195 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 CGRRF1Q99675 332 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 DPH1Q9BZG8 443 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 RSPH9Q9H1X1 276 aaPredicted RBP11.33□□□□□ -0.6
DDX39B-201ENST00000376177 POLR1BQ9H9Y6 1135 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 SEL1LQ9UBV2 794 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 LRRK2Q5S007 2527 aa11.33□□□□□ -0.6
DDX39B-201ENST00000376177 TLN1Q9Y490 2541 aaKnown RBP11.33□□□□□ -0.6
DDX39B-201ENST00000376177 SPENQ96T58 3664 aaKnown RBP11.32□□□□□ -0.6
DDX39B-201ENST00000376177 ZFC3H1O60293 1989 aaKnown RBP11.32□□□□□ -0.6
DDX39B-201ENST00000376177 GOLGA6CA6NDK9 693 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 CES2O00748 559 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 YKT6O15498 198 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 FFAR2O15552 330 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 SUV39H1O43463 412 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 SIN3BO75182 1162 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 SYF2O95926 243 aaKnown RBP11.32□□□□□ -0.6
DDX39B-201ENST00000376177 ATP1A1P05023 1023 aaKnown RBP11.32□□□□□ -0.6
DDX39B-201ENST00000376177 GOLGA6DP0CG33 693 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 GIMD1P0DJR0 217 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 GAP43P17677 238 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 CD70P32970 193 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 NDST1P52848 882 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 ZBTB16Q05516 673 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 CLN3Q13286 438 aa11.32□□□□□ -0.6
DDX39B-201ENST00000376177 MAPK8IP2Q13387 824 aaPredicted RBP11.32□□□□□ -0.6
DDX39B-201ENST00000376177 SNRNP35Q16560 246 aaKnown RBP11.32□□□□□ -0.6
DDX39B-201ENST00000376177 MAN2A1Q16706 1144 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms