RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 RGS14O43566 566 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 EPN2O95208 641 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 POLR2EP19388 210 aaKnown RBP13.91□□□□□ -0.18
COL4A1-201ENST00000375820 ADRA1DP25100 572 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 MIPP30301 263 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 DLG4P78352 724 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 CNTN2Q02246 1040 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 ITGADQ13349 1161 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 MADCAM1Q13477 382 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 ERO1BQ86YB8 467 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 LRRC4BQ9NT99 713 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 OGDHLQ9ULD0 1010 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 EFR3BQ9Y2G0 817 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 ANKDD1BA6NHY2 528 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 PIGNO95427 931 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 LSM8O95777 96 aaKnown RBP13.91□□□□□ -0.18
COL4A1-201ENST00000375820 CENPIQ92674 756 aaPredicted RBP13.91□□□□□ -0.18
COL4A1-201ENST00000375820 MFSD1Q9H3U5 465 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 UBA2Q9UBT2 640 aaPredicted RBP13.91□□□□□ -0.18
COL4A1-201ENST00000375820 HES2Q9Y543 173 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 ANKRD63C9JTQ0 380 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 LRATO95237 230 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 MMP13P45452 471 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 PTENP60484 403 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 CNSTQ6PJW8 725 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 FAM9CQ8IZT9 166 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 HNRNPLLQ8WVV9 542 aaKnown RBP13.91□□□□□ -0.18
COL4A1-201ENST00000375820 ACSL4O60488 711 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 ADORA2AP29274 412 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 MTAPQ13126 283 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 PAPD7Q5XG87 772 aaKnown RBP13.91□□□□□ -0.18
COL4A1-201ENST00000375820 RETSATQ6NUM9 610 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 METTL7BQ6UX53 244 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 KIAA0408Q6ZU52 694 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 DNAJB14Q8TBM8 379 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 PMM1Q92871 262 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 EXOC2Q96KP1 924 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 FKBP6O75344 327 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 KRT33AO76009 404 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 MED26O95402 600 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 RENBPP51606 427 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 OSCP1Q8WVF1 389 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 ULBP1Q9BZM6 244 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 EHD4Q9H223 541 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 FANCEQ9HB96 536 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 THAP1Q9NVV9 213 aa13.91□□□□□ -0.18
COL4A1-201ENST00000375820 A0A0B4J269 797 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 KCNH1O95259 989 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 SLC34A1Q06495 639 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 MAD2L1Q13257 205 aaPredicted RBP13.9□□□□□ -0.18
COL4A1-201ENST00000375820 ARMC12Q5T9G4 340 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 KIAA1324Q6UXG2 1013 aaKnown RBP13.9□□□□□ -0.18
COL4A1-201ENST00000375820 PNMA5Q96PV4 448 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 PURBQ96QR8 312 aaKnown RBP13.9□□□□□ -0.18
COL4A1-201ENST00000375820 GANQ9H2C0 597 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 FBXO44Q9H4M3 255 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 ARHGAP28Q9P2N2 729 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 ALKQ9UM73 1620 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 ZBTB11O95625 1053 aaPredicted RBP13.9□□□□□ -0.18
COL4A1-201ENST00000375820 CRABP2P29373 138 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 C21orf59P57076 290 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 FAM124AQ86V42 546 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 TERB1Q8NA31 727 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 RTFDC1Q9BY42 306 aaPredicted RBP13.9□□□□□ -0.18
COL4A1-201ENST00000375820 EPB41L1Q9H4G0 881 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 VAV3Q9UKW4 847 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 TEX28O15482 410 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 TCEA3O75764 348 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 IL1R1P14778 569 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 AMD1P17707 334 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 ADRM1Q16186 407 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 SNAP47Q5SQN1 464 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 GCNT7Q6ZNI0 430 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 SVOPQ8N4V2 548 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 C2orf73Q8N5S3 287 aaPredicted RBP13.9□□□□□ -0.18
COL4A1-201ENST00000375820 PDCD2LQ9BRP1 358 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 NAT9Q9BTE0 207 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 ADARB2Q9NS39 739 aaKnown RBP13.9□□□□□ -0.18
COL4A1-201ENST00000375820 NCKAP1Q9Y2A7 1128 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 SH3GLB1Q9Y371 365 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 PCDHA3Q9Y5H8 950 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 DDX3XO00571 662 aaKnown RBP eCLIP13.9□□□□□ -0.18
COL4A1-201ENST00000375820 AP5Z1O43299 807 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 GZMAP12544 262 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 SLC25A3Q00325 362 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 TBX2Q13207 712 aaPredicted RBP13.9□□□□□ -0.18
COL4A1-201ENST00000375820 NDUFAF6Q330K2 333 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 TMPRSS6Q8IU80 811 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 DENND1CQ8IV53 801 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 ZMYND8Q9ULU4 1186 aaPredicted RBP13.9□□□□□ -0.18
COL4A1-201ENST00000375820 MYRFQ9Y2G1 1151 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 FAM237BA0A1B0GVD1 139 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 CTPS1P17812 591 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 VPS72Q15906 364 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 PLA2G4EQ3MJ16 856 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 HIPK1Q86Z02 1210 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 ARMC8Q8IUR7 673 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 SELENOMQ8WWX9 145 aa13.9□□□□□ -0.18
COL4A1-201ENST00000375820 MTG1Q9BT17 334 aaPredicted RBP13.9□□□□□ -0.18
COL4A1-201ENST00000375820 UGT2B28Q9BY64 529 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms