RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 EPB41L1Q9H4G0 881 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 COX16Q9P0S2 106 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 KIAA1257Q9ULG3 409 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 A0A1B0GTW7 788 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 THRAP10827 490 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 ENO3P13929 434 aaPredicted RBP14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 ACAT1P24752 427 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 RGS2P41220 211 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 DPP6P42658 865 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 CEACAM7Q14002 265 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 LSM12Q3MHD2 195 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 CCDC153Q494R4 210 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 MORN1Q5T089 497 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 FAM156AQ8NDB6 213 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 ZNF669Q96BR6 464 aaPredicted RBP14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 LENG1Q96BZ8 264 aaPredicted RBP14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 PKP2Q99959 881 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 NDUFA13Q9P0J0 144 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 GNEQ9Y223 722 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 LRRC37A2A6NM11 1700 aa14.4□□□□□ -0.1
CLCNKA-202ENST00000375692 GOLGA8TH3BQL2 631 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 KCNK1O00180 336 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 GAS2O43903 313 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 TCN1P20061 433 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 SAT1P21673 171 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 GARSP41250 739 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 RPL26P61254 145 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 ADGRE1Q14246 886 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 ZNF423Q2M1K9 1284 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 HSP90AA5PQ58FG0 334 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 GRTP1Q5TC63 336 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 B3GNT6Q6ZMB0 384 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 ZNF567Q8N184 647 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 BHLHE22Q8NFJ8 381 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 PPP1R13LQ8WUF5 828 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 RBBP8Q99708 897 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 CPNE1Q99829 537 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 FERMT1Q9BQL6 677 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 C11orf84Q9BUA3 381 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 NUF2Q9BZD4 464 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 ASB7Q9H672 318 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 ZFYVE28Q9HCC9 887 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 RIMS3Q9UJD0 308 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 USP3Q9Y6I4 520 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 RGSL1A5PLK6 1076 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 TRIM13O60858 407 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 TRPA1O75762 1119 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 JUNP05412 331 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 SMPD1P17405 629 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 DESP17661 470 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 ARF4P18085 180 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 ADORA2BP29275 332 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 TM4SF4P48230 202 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 ARHGAP1Q07960 439 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 RARS2Q5T160 578 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 OLFML2BQ68BL8 750 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 BNC2Q6ZN30 1099 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 KBTBD7Q8WVZ9 684 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 CENPIQ92674 756 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 KIF12Q96FN5 646 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 CATSPER2Q96P56 530 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 GALNT8Q9NY28 637 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 PTTG2Q9NZH5 202 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 LMCD1Q9NZU5 365 aa14.39□□□□□ -0.11
CLCNKA-202ENST00000375692 C2P06681 752 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 MCF2P10911 925 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 CCDC130P13994 396 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PCSK6P29122 969 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PITX1P78337 314 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PIGGQ5H8A4 983 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 METTL21CQ5VZV1 264 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 NXNQ6DKJ4 435 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PID1Q7Z2X4 250 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 AFG1LQ8WV93 481 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 ILKAPQ9H0C8 392 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PRDM12Q9H4Q4 367 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 NMRAL1Q9HBL8 299 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PRMT7Q9NVM4 692 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 SCN1AP35498 2009 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PLXNA1Q9UIW2 1896 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 CCDC78A2IDD5 438 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 ZNF487B1APH4 448 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 TK2O00142 265 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 MATN2O00339 956 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PENKP01210 267 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 VTNP04004 478 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PDGFRBP09619 1106 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 SPRP35270 261 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 ARL4AP40617 200 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PTPN9P43378 593 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 NUMBP49757 651 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 SERPINB8P50452 374 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 SREBF2Q12772 1141 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 MAP2K5Q13163 448 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 CYLC2Q14093 348 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 PDK1Q15118 436 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 ZSCAN18Q8TBC5 510 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 URGCPQ8TCY9 931 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 MFSD3Q96ES6 412 aa14.38□□□□□ -0.11
CLCNKA-202ENST00000375692 KLHL32Q96NJ5 620 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms