RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 BZW2Q9Y6E2 419 aaKnown RBP12.55□□□□□ -0.4
LSM2-208ENST00000375661 CELSR3Q9NYQ7 3312 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 SMG1Q96Q15 3661 aaKnown RBP12.54□□□□□ -0.4
LSM2-208ENST00000375661 LRRC72A6NJI9 287 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 RRP8O43159 456 aaKnown RBP12.54□□□□□ -0.4
LSM2-208ENST00000375661 FYNP06241 537 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 ITGAVP06756 1048 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 ABCB4P21439 1286 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 MMP8P22894 467 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 CCR5P51681 352 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 GALCP54803 685 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 ST8SIA6P61647 398 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 IL9RQ01113 521 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 PTP4A2Q12974 167 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 ILKQ13418 452 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 TDRD12Q587J7 1177 aaKnown RBP12.54□□□□□ -0.4
LSM2-208ENST00000375661 BSPRYQ5W0U4 402 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 NUGGCQ68CJ6 796 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 MSANTD2Q6P1R3 559 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 OLFML1Q6UWY5 402 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 LAYNQ6UX15 382 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 FAM183BPQ6ZVS7 135 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 DNAAF5Q86Y56 855 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 PHF13Q86YI8 300 aaPredicted RBP12.54□□□□□ -0.4
LSM2-208ENST00000375661 UNC45BQ8IWX7 931 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 OR2T34Q8NGX1 318 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 SNIP1Q8TAD8 396 aaKnown RBP12.54□□□□□ -0.4
LSM2-208ENST00000375661 SAP25Q8TEE9 199 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 AZIN2Q96A70 460 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 TTC17Q96AE7 1141 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 C18orf8Q96DM3 657 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 CRELD1Q96HD1 420 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 CHP1Q99653 195 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 FBXL12Q9NXK8 326 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 ADAMTS1Q9UHI8 967 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 SFMBT1Q9UHJ3 866 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 ASXL3Q9C0F0 2248 aa12.54□□□□□ -0.4
LSM2-208ENST00000375661 TARSL2A2RTX5 802 aaKnown RBP12.53□□□□□ -0.4
LSM2-208ENST00000375661 C10orf142B7Z368 130 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 IGLV3-27P01718 113 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 CD38P28907 300 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 CD70P32970 193 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 EIF4A3P38919 411 aaKnown RBP12.53□□□□□ -0.4
LSM2-208ENST00000375661 SLC11A2P49281 568 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 ARRB1P49407 418 aaPredicted RBP12.53□□□□□ -0.4
LSM2-208ENST00000375661 ACADVLP49748 655 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 SLC6A3Q01959 620 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 MAPK8IP2Q13387 824 aaPredicted RBP12.53□□□□□ -0.4
LSM2-208ENST00000375661 TAF5Q15542 800 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 ASTE1Q2TB18 679 aaPredicted RBP12.53□□□□□ -0.4
LSM2-208ENST00000375661 HNRNPA1L2Q32P51 320 aaKnown RBP12.53□□□□□ -0.4
LSM2-208ENST00000375661 SLC45A4Q5BKX6 768 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 PIK3R6Q5UE93 754 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 OR6B2Q6IFH4 312 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 ACAD10Q6JQN1 1059 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 MMS22LQ6ZRQ5 1243 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 XYLT1Q86Y38 959 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 OXR1Q8N573 874 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 SPC24Q8NBT2 197 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 FIBINQ8TAL6 211 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 GANCQ8TET4 914 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 TSC1Q92574 1164 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 MYO19Q96H55 970 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 SLC6A18Q96N87 628 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 C11orf70Q9BRQ4 267 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 SYNCQ9H7C4 482 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 ERVMER34-1Q9H9K5 563 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 GDF3Q9NR23 364 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 NENFQ9UMX5 172 aa12.53□□□□□ -0.4
LSM2-208ENST00000375661 A0A087X0T9 212 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 SSU72P8A0A1W2PR75 194 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 A0A1W2PR77 199 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 TYW5A2RUC4 315 aaKnown RBP12.52□□□□□ -0.41
LSM2-208ENST00000375661 FAM47DPA6NHR8 397 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 TMCO5BA8MYB1 307 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 SART1O43290 800 aaKnown RBP12.52□□□□□ -0.41
LSM2-208ENST00000375661 TLX3O43711 291 aaPredicted RBP12.52□□□□□ -0.41
LSM2-208ENST00000375661 TBL1XO60907 577 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 SIN3BO75182 1162 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 LTFP02788 710 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 SRPRAP08240 638 aaKnown RBP12.52□□□□□ -0.41
LSM2-208ENST00000375661 FAM228BP0C875 321 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 GZMAP12544 262 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 ITPKBP27987 946 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 NSFP46459 744 aaKnown RBP12.52□□□□□ -0.41
LSM2-208ENST00000375661 RXRGP48443 463 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 SGSHP51688 502 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 CDK17Q00537 523 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 SHBQ15464 509 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 CST6Q15828 149 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 TSR1Q2NL82 804 aaKnown RBP12.52□□□□□ -0.41
LSM2-208ENST00000375661 HES3Q5TGS1 186 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 FBXL19Q6PCT2 694 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 NCEH1Q6PIU2 408 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 MON1BQ7L1V2 547 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 PHLDB2Q86SQ0 1253 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 GATAD2AQ86YP4 633 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 MFN1Q8IWA4 741 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 WFDC5Q8TCV5 224 aa12.52□□□□□ -0.41
LSM2-208ENST00000375661 EDEM1Q92611 657 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms