RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 SNX1Q13596 522 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 CCNG2Q16589 344 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 MBLAC2Q68D91 279 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 LRRC49Q8IUZ0 686 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 ATPAF2Q8N5M1 289 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 DCAF4L2Q8NA75 395 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 WFIKKN2Q8TEU8 576 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 TSGA13Q96PP4 275 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 VPS51Q9UID3 782 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 MUTYHQ9UIF7 546 aa21.09■□□□□ 0.97
NELFE-202ENST00000375429 A0A0A0MRY4 1105 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 TBC1D3BA6NDS4 549 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 H7C0C1 242 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 PPP1R12AO14974 1030 aaPredicted RBP21.08■□□□□ 0.97
NELFE-202ENST00000375429 MCF2LO15068 1137 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 CCNCP24863 283 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 CTSOP43234 321 aaPredicted RBP21.08■□□□□ 0.97
NELFE-202ENST00000375429 ATP5OP48047 213 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 ARF5P84085 180 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 PPIDQ08752 370 aaKnown RBP21.08■□□□□ 0.97
NELFE-202ENST00000375429 PON2Q15165 354 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 MLF2Q15773 248 aaPredicted RBP21.08■□□□□ 0.97
NELFE-202ENST00000375429 WHAMMP3Q1A5X7 153 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 LEKR1Q6ZMV7 388 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 TTC17Q96AE7 1141 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 FRMD8P1Q9BZ68 369 aaPredicted RBP21.08■□□□□ 0.97
NELFE-202ENST00000375429 WNT16Q9UBV4 365 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 CA14Q9ULX7 337 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 HPCAL4Q9UM19 191 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 ACTL7AQ9Y615 435 aa21.08■□□□□ 0.97
NELFE-202ENST00000375429 PRAMEF11O60813 436 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 APODP05090 189 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 POLR2EP19388 210 aaKnown RBP21.07■□□□□ 0.96
NELFE-202ENST00000375429 GRIA2P42262 883 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 IL10RBQ08334 325 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 AP1B1Q10567 949 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 PRKD1Q15139 912 aaPredicted RBP21.07■□□□□ 0.96
NELFE-202ENST00000375429 CYP1B1Q16678 543 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 PREPLQ4J6C6 727 aaPredicted RBP21.07■□□□□ 0.96
NELFE-202ENST00000375429 SLC45A4Q5BKX6 768 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 DARS2Q6PI48 645 aaKnown RBP21.07■□□□□ 0.96
NELFE-202ENST00000375429 TPRG1Q6ZUI0 275 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 TFB1MQ8WVM0 346 aaKnown RBP21.07■□□□□ 0.96
NELFE-202ENST00000375429 SORCS1Q8WY21 1168 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 EZH1Q92800 747 aaPredicted RBP21.07■□□□□ 0.96
NELFE-202ENST00000375429 ACDQ96AP0 544 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 C2orf49Q9BVC5 232 aaPredicted RBP21.07■□□□□ 0.96
NELFE-202ENST00000375429 BRD8Q9H0E9 1235 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 SP110Q9HB58 689 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 PDFQ9HBH1 243 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 HOMER3Q9NSC5 361 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 ELOVL2Q9NXB9 296 aa21.07■□□□□ 0.96
NELFE-202ENST00000375429 ANTXRLA6NF34 631 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 HACD1B0YJ81 288 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 CD160O95971 181 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 PEX11BO96011 259 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 VAV1P15498 845 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 CD72P21854 359 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 BYSLQ13895 437 aaKnown RBP21.06■□□□□ 0.96
NELFE-202ENST00000375429 OASLQ15646 514 aaKnown RBP21.06■□□□□ 0.96
NELFE-202ENST00000375429 TMEM196Q5HYL7 178 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 FAM182AQ5T1J6 154 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 DRICH1Q6PGQ1 229 aaPredicted RBP21.06■□□□□ 0.96
NELFE-202ENST00000375429 LINGO4Q6UY18 593 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 CCDC13Q8IYE1 715 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 UBALD2Q8IYN6 164 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 FAM3CQ92520 227 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 NKD2Q969F2 451 aaPredicted RBP21.06■□□□□ 0.96
NELFE-202ENST00000375429 MAGOHBQ96A72 148 aaKnown RBP21.06■□□□□ 0.96
NELFE-202ENST00000375429 MSANTD3Q96H12 275 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 QKIQ96PU8 341 aaKnown RBP eCLIP21.06■□□□□ 0.96
NELFE-202ENST00000375429 CIPCQ9C0C6 399 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 MYO18AQ92614 2054 aaKnown RBP21.06■□□□□ 0.96
NELFE-202ENST00000375429 GOLGA6L10A0A0M3HER8 536 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 KRBA1A5PL33 1030 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 MT-CO1P00395 513 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 RBL1P28749 1068 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 KCNJ1P48048 391 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 ZNF33AQ06730 810 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 CKAP4Q07065 602 aaKnown RBP21.06■□□□□ 0.96
NELFE-202ENST00000375429 FSTL4Q6MZW2 842 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 TTC27Q6P3X3 843 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 ZNF572Q7Z3I7 529 aaPredicted RBP21.06■□□□□ 0.96
NELFE-202ENST00000375429 SUGP1Q8IWZ8 645 aaKnown RBP21.06■□□□□ 0.96
NELFE-202ENST00000375429 C12orf50Q8NA57 414 aaPredicted RBP21.06■□□□□ 0.96
NELFE-202ENST00000375429 SPATA4Q8NEY3 305 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 CYB5D2Q8WUJ1 264 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 ATG2BQ96BY7 2078 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 RPL10LQ96L21 214 aaKnown RBP21.06■□□□□ 0.96
NELFE-202ENST00000375429 USP29Q9HBJ7 922 aa21.06■□□□□ 0.96
NELFE-202ENST00000375429 RBM12Q9NTZ6 932 aaKnown RBP21.06■□□□□ 0.96
NELFE-202ENST00000375429 BCLAF3A2AJT9 711 aaKnown RBP21.05■□□□□ 0.96
NELFE-202ENST00000375429 K7EQS6 105 aa21.05■□□□□ 0.96
NELFE-202ENST00000375429 TIMM44O43615 452 aa21.05■□□□□ 0.96
NELFE-202ENST00000375429 PHF2O75151 1096 aa21.05■□□□□ 0.96
NELFE-202ENST00000375429 ECT2LQ008S8 904 aa21.05■□□□□ 0.96
NELFE-202ENST00000375429 SULT2A1Q06520 285 aa21.05■□□□□ 0.96
NELFE-202ENST00000375429 TIGD7Q6NT04 549 aaPredicted RBP21.05■□□□□ 0.96
NELFE-202ENST00000375429 TMEM121Q9BTD3 319 aa21.05■□□□□ 0.96
NELFE-202ENST00000375429 DDX47Q9H0S4 455 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms