RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TIGD2Q4W5G0 525 aa20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 CYP2R1Q6VVX0 501 aa20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 C14orf80Q86SX3 495 aa20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 PCDH20Q8N6Y1 951 aaKnown RBP20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 ZNF641Q96N77 438 aaPredicted RBP20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 NUB1Q9Y5A7 615 aa20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 LOXHD1Q8IVV2 1947 aa20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 PLA2G6O60733 806 aa20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 TIPRLO75663 272 aa20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 MYF6P23409 242 aa20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 HSD17B4P51659 736 aa20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 TAP1Q03518 808 aa20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 CHST15Q7LFX5 561 aaPredicted RBP20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 FAM110BQ8TC76 370 aa20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 SREK1Q8WXA9 508 aaKnown RBP20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 MOCS1Q9NZB8 636 aa20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 CNOT6Q9ULM6 557 aaKnown RBP20.95■□□□□ 0.94
TMEFF1-201ENST00000374879 ANKRD34BA5PLL1 514 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 NFIBO00712 420 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 DHX15O43143 795 aaKnown RBP20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 CLPXO76031 633 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 MYO1DO94832 1006 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 MAP3K6O95382 1288 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 APBA3O96018 575 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 GRIA1P42261 906 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 EMC1Q8N766 993 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 TJP2Q9UDY2 1190 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 SFMBT1Q9UHJ3 866 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 CNTNAP1P78357 1384 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 SAC3D1A6NKF1 404 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 NOL3O60936 208 aaKnown RBP20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 YWHABP31946 246 aaKnown RBP20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 TNK2Q07912 1038 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 SELENBP1Q13228 472 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 NDUFA5Q16718 116 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 ZNF394Q53GI3 561 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 ZNF534Q76KX8 674 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 MCF2L2Q86YR7 1114 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 LPGAT1Q92604 370 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 LRRC39Q96DD0 335 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 MTG1Q9BT17 334 aaPredicted RBP20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 TMEM39BQ9GZU3 492 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 SDCBP2Q9H190 292 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 MUC3BQ9H195 1237 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 SEPT3Q9UH03 358 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 CNTN6Q9UQ52 1028 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 SLC27A5Q9Y2P5 690 aa20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 TMA7Q9Y2S6 64 aaKnown RBP20.94■□□□□ 0.94
TMEFF1-201ENST00000374879 GCATO75600 419 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 MX2P20592 715 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 MPSTP25325 297 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 RBL1P28749 1068 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 RFTN1Q14699 578 aaPredicted RBP20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 SNX29P2Q8IUI4 249 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 TRAF6Q9Y4K3 522 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 PSAT1Q9Y617 370 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 TCAF2A6NFQ2 919 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 HNRNPDLO14979 420 aaKnown RBP20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 JRKO75564 520 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 RAD17O75943 681 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 SLC7A1P30825 629 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 CAP2P40123 477 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 OPRL1P41146 370 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 SOX10P56693 466 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 CNTN2Q02246 1040 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 FRA10AC1Q70Z53 315 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 CPSF7Q8N684 471 aaKnown RBP20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 CMASQ8NFW8 434 aaPredicted RBP20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 BSNDQ8WZ55 320 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 CEP44Q9C0F1 390 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 KMT5AQ9NQR1 393 aa20.93■□□□□ 0.94
TMEFF1-201ENST00000374879 A6NL46 340 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 E7ENX8 843 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 TADA2AO75478 443 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 EIF2S1P05198 315 aaKnown RBP20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 ICAM1P05362 532 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 CHRNGP07510 517 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 KRT3P12035 628 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 EPHX2P34913 555 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 GPAT2Q6NUI2 795 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 Q8N9G6 341 aaPredicted RBP20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 TMEM35BQ8NCS4 154 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 OTUD5Q96G74 571 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 UHRF1Q96T88 793 aaPredicted RBP20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 ADI1Q9BV57 179 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 ZNF385DQ9H6B1 395 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 PARVBQ9HBI1 364 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 NRP1O14786 923 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 RSL1D1O76021 490 aaKnown RBP20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 HPCAL1P37235 193 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 MAGEA3P43357 314 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 NME5P56597 212 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 PSME3P61289 254 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 GRSF1Q12849 480 aaKnown RBP eCLIP20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 RALGDSQ12967 914 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 SPP2Q13103 211 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 PGS1Q32NB8 556 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 TKFCQ3LXA3 575 aa20.92■□□□□ 0.94
TMEFF1-201ENST00000374879 NXNQ6DKJ4 435 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms