RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 GPR180Q86V85 440 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 ANKRD13BQ86YJ7 626 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 ALDH16A1Q8IZ83 802 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 ADGRF4Q8IZF3 695 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 UBR7Q8N806 425 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 MKL1Q969V6 931 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 DNAJC19Q96DA6 116 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 TXLNGYQ9BZA5 131 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.41□□□□□ -0.74
CD28-202ENST00000374481 TBC1D13Q9NVG8 400 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 COMMD8Q9NX08 183 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 DNAJC28Q9NX36 388 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 C3orf18Q9UK00 162 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 SLC30A1Q9Y6M5 507 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 SPATA31D1Q6ZQQ2 1576 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 ANKRD34BA5PLL1 514 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 A8MU76 341 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 H3BNH8 94 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 DYRK3O43781 588 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 ENPEPQ07075 957 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 DUS1LQ6P1R4 473 aaKnown RBP10.41□□□□□ -0.74
CD28-202ENST00000374481 KAT5Q92993 513 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 ELMO2Q96JJ3 720 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 RBBP8Q99708 897 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 NMRAL1Q9HBL8 299 aa10.41□□□□□ -0.74
CD28-202ENST00000374481 HEMK1Q9Y5R4 338 aaPredicted RBP10.41□□□□□ -0.74
CD28-202ENST00000374481 HEG1Q9ULI3 1381 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 A0A088AWK7 358 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 ABCB1P08183 1280 aaPredicted RBP10.4□□□□□ -0.74
CD28-202ENST00000374481 RFC4P35249 363 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 HOXD13P35453 343 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 CAPGP40121 348 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 RAP1GAPP47736 663 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 HNRNPDQ14103 355 aaKnown RBP10.4□□□□□ -0.74
CD28-202ENST00000374481 FRG1Q14331 258 aaKnown RBP10.4□□□□□ -0.74
CD28-202ENST00000374481 ZNF267Q14586 743 aaPredicted RBP10.4□□□□□ -0.74
CD28-202ENST00000374481 DDR2Q16832 855 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 TIMM50Q3ZCQ8 353 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 ATP13A4Q4VNC1 1196 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 MFSD14BQ5SR56 506 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 OGFRL1Q5TC84 451 aaPredicted RBP10.4□□□□□ -0.74
CD28-202ENST00000374481 CYP4A22Q5TCH4 519 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 SLC15A3Q8IY34 581 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 HACE1Q8IYU2 909 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 LEMD2Q8NC56 503 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 ZNF540Q8NDQ6 660 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 OR2T34Q8NGX1 318 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 OR2T3Q8NH03 318 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 SERAC1Q96JX3 654 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 TSEN34Q9BSV6 310 aaKnown RBP10.4□□□□□ -0.74
CD28-202ENST00000374481 PRRG3Q9BZD7 231 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 NYXQ9GZU5 481 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 RIBC2Q9H4K1 309 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 CD320Q9NPF0 282 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 IFT80Q9P2H3 777 aaPredicted RBP10.4□□□□□ -0.74
CD28-202ENST00000374481 MBD2Q9UBB5 411 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 TTC34A8MYJ7 566 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 POLRMTO00411 1230 aaKnown RBP10.4□□□□□ -0.74
CD28-202ENST00000374481 NDUFS2O75306 463 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 VDRP11473 427 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 GPC3P51654 580 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 TCP10Q12799 353 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 FSTL1Q12841 308 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 CCNIQ14094 377 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 ZNF667Q5HYK9 610 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 FGD3Q5JSP0 725 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 ARHGEF16Q5VV41 709 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 ZNF57Q68EA5 555 aaPredicted RBP10.4□□□□□ -0.74
CD28-202ENST00000374481 IL31Q6EBC2 164 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 MZT2BQ6NZ67 158 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 ERICH5Q6P6B1 374 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 ITIH5Q86UX2 942 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 TBC1D21Q8IYX1 336 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 ATG16L2Q8NAA4 619 aa10.4□□□□□ -0.74
CD28-202ENST00000374481 SYTL5Q8TDW5 730 aaPredicted RBP10.4□□□□□ -0.74
CD28-202ENST00000374481 K7ERI5 159 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 M0QYV0 167 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 TBX3O15119 743 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 KMOO15229 486 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 TGM2P21980 687 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 AVPR1AP37288 418 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 SPIRE1Q08AE8 756 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 RAB39AQ14964 217 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 QRICH1Q2TAL8 776 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 ZNF284Q2VY69 593 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 SLFN12LQ6IEE8 588 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 SULT1C3Q6IMI6 304 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 HMBOX1Q6NT76 420 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 SYCE2Q6PIF2 218 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 PAOXQ6QHF9 649 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 TMEM126BQ8IUX1 230 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 ZNF276Q8N554 614 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 C4orf32Q8N8J7 132 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 ACMSDQ8TDX5 336 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 ASB12Q8WXK4 309 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 TNFRSF25Q93038 417 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 NODALQ96S42 347 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 ISCA1Q9BUE6 129 aa10.4□□□□□ -0.75
CD28-202ENST00000374481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.4□□□□□ -0.75
CD28-202ENST00000374481 PIPSLA2A3N6 862 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms