RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 HOXD9P28356 352 aaPredicted RBP16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 YBEYP58557 167 aaPredicted RBP16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 POLD3Q15054 466 aaPredicted RBP16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 DUSP6Q16828 381 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 BBS9Q3SYG4 887 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 PARP15Q460N3 678 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 PPP2R2DQ66LE6 453 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 CXorf57Q6NSI4 855 aaKnown RBP16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 CEP128Q6ZU80 1094 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 CHST9Q7L1S5 443 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 PDIK1LQ8N165 341 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 OXNAD1Q96HP4 312 aaPredicted RBP16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 TMEM109Q9BVC6 243 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 PDFQ9HBH1 243 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 DONSONQ9NYP3 566 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 CFAP97Q9P2B7 532 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 ARHGAP26Q9UNA1 814 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 MYO9BQ13459 2157 aa16.03■□□□□ 0.16
NIPAL3-204ENST00000374399 CCDC195A0A1B0GUA6 201 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 ARHGAP42A6NI28 874 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 RFXAPO00287 272 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 LEFTY2O00292 366 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 OPA1O60313 960 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 ABHD2P08910 425 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 ELK3P41970 407 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 EIF3BP55884 814 aaKnown RBP16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 SLC10A7Q0GE19 358 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 IHHQ14623 411 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 RABGAP1LQ5R372 815 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 GPR158Q5T848 1215 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 TIGD7Q6NT04 549 aaPredicted RBP16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 GRASPQ7Z6J2 395 aaPredicted RBP16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 MPP5Q8N3R9 675 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 TEX26Q8N6G2 289 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 FBXO36Q8NEA4 188 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 SIGLEC10Q96LC7 697 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 GCNAQ96QF7 691 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 FRMD8Q9BZ67 464 aaPredicted RBP16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 RSPH14Q9UHP6 348 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 TBC1D30Q9Y2I9 924 aa16.02■□□□□ 0.16
NIPAL3-204ENST00000374399 RNF40O75150 1001 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 CLDN11O75508 207 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 SUN1O94901 812 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 AP2A1O95782 977 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 NUMBP49757 651 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 CDK16Q00536 496 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 TNK2Q07912 1038 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 SPARCL1Q14515 664 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 RAB30Q15771 203 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 PPP1R21Q6ZMI0 780 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 BBS7Q8IWZ6 715 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 CMTM8Q8IZV2 173 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 C12orf76Q8N812 135 aaPredicted RBP16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 OR7D4Q8NG98 312 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 EPS8L3Q8TE67 593 aaKnown RBP16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 USP13Q92995 863 aaPredicted RBP16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 ZSWIM3Q96MP5 696 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 RUFY1Q96T51 708 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 LMAN2LQ9H0V9 348 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 TASP1Q9H6P5 420 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 TLE6Q9H808 572 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 GLOD4Q9HC38 313 aa16.02■□□□□ 0.15
NIPAL3-204ENST00000374399 A0A1B0GVM2 712 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 TCAF2A6NFQ2 919 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 E7EVH7 732 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 PRAMEF11O60813 436 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 FGF19O95750 216 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 GCAP28676 217 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 SSTR1P30872 391 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 IFNAR2P48551 515 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 NRIP1P48552 1158 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 GNA12Q03113 381 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 IL10RBQ08334 325 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 GPS2Q13227 327 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 HNRNPDQ14103 355 aaKnown RBP16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 FSCBQ5H9T9 825 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 ITPRIPL1Q6GPH6 555 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 LRRC8BQ6P9F7 803 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 PGBD5Q8N414 524 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 PYROXD1Q8WU10 500 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 TTC25Q96NG3 672 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 FCRL5Q96RD9 977 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 DDX50Q9BQ39 737 aaKnown RBP16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 RBM22Q9NW64 420 aaKnown RBP eCLIP16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 EURLQ9NYK6 297 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 MSRAQ9UJ68 235 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 CHMP2BQ9UQN3 213 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 MYOFQ9NZM1 2061 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 C5orf42Q9H799 3197 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 SZT2Q5T011 3432 aa16.01■□□□□ 0.15
NIPAL3-204ENST00000374399 XYLBO75191 536 aa16■□□□□ 0.15
NIPAL3-204ENST00000374399 TCEA3O75764 348 aa16■□□□□ 0.15
NIPAL3-204ENST00000374399 C1QAP02745 245 aa16■□□□□ 0.15
NIPAL3-204ENST00000374399 MLNP12872 115 aa16■□□□□ 0.15
NIPAL3-204ENST00000374399 CEBPBP17676 345 aa16■□□□□ 0.15
NIPAL3-204ENST00000374399 DDX6P26196 483 aaKnown RBP eCLIP16■□□□□ 0.155e-6■■■■■ 46.6
NIPAL3-204ENST00000374399 CCDC38Q502W7 563 aa16■□□□□ 0.15
NIPAL3-204ENST00000374399 HSP90B2PQ58FF3 399 aa16■□□□□ 0.15
NIPAL3-204ENST00000374399 TNFAIP8L3Q5GJ75 292 aa16■□□□□ 0.15
NIPAL3-204ENST00000374399 RNF43Q68DV7 783 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms