RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 NCKIPSDQ9NZQ3 722 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 NCKAP1Q9Y2A7 1128 aa14.55□□□□□ -0.08
TRAF1-201ENST00000373887 C21orf59P57076 290 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 DLK2Q6UY11 383 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 FAM20CQ8IXL6 584 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 ANKRD7Q92527 254 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 CDK5RAP1Q96SZ6 601 aaKnown RBP14.54□□□□□ -0.08
TRAF1-201ENST00000373887 TOR4AQ9NXH8 423 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 MSCO60682 206 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 PDE9AO76083 593 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 SLC12A3P55017 1021 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 FASTKQ14296 549 aaKnown RBP14.54□□□□□ -0.08
TRAF1-201ENST00000373887 DSG4Q86SJ6 1040 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 STK32CQ86UX6 486 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 BBS4Q96RK4 519 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 ULBP1Q9BZM6 244 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 MBD2Q9UBB5 411 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 TPBGLP0DKB5 382 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 N4BP2L1Q5TBK1 243 aaPredicted RBP14.54□□□□□ -0.08
TRAF1-201ENST00000373887 ZNF605Q86T29 641 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 FAM9CQ8IZT9 166 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 ABRAQ8N0Z2 381 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 KYQ8NBH2 561 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 RHBGQ9H310 441 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 MID1IP1Q9NPA3 183 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 EHD3Q9NZN3 535 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 WHRNQ9P202 907 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 ST3GAL5Q9UNP4 418 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 LRRC14BA6NHZ5 514 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 JAK1P23458 1154 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 PTPN4P29074 926 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 DGUOKQ16854 277 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 DET1Q7L5Y6 550 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 CAPSLQ8WWF8 208 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 APOL4Q9BPW4 351 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 MRPS23Q9Y3D9 190 aaKnown RBP14.54□□□□□ -0.08
TRAF1-201ENST00000373887 ASTN2O75129 1339 aaPredicted RBP14.54□□□□□ -0.08
TRAF1-201ENST00000373887 CLOCKO15516 846 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 CABYRO75952 493 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 DGCR6Q14129 220 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 OTOP2Q7RTS6 562 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 VGLL2Q8N8G2 317 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 OMDQ99983 421 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 WDR18Q9BV38 432 aa14.54□□□□□ -0.08
TRAF1-201ENST00000373887 UXTQ9UBK9 157 aaPredicted RBP14.54□□□□□ -0.08
TRAF1-201ENST00000373887 DRG1Q9Y295 367 aaKnown RBP14.54□□□□□ -0.08
TRAF1-201ENST00000373887 LOC100506127A0A0U1RQW1 187 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 WDR27A2RRH5 827 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 TMEM114B3SHH9 223 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 NDUFS2O75306 463 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 RTN3O95197 1032 aaPredicted RBP14.53□□□□□ -0.08
TRAF1-201ENST00000373887 TAF8Q7Z7C8 310 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 DENND1CQ8IV53 801 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 POU5F2Q8N7G0 328 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 MYOCQ99972 504 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 ELOVL4Q9GZR5 314 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 COPG2Q9UBF2 871 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 E5RJQ4 531 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 CYP2A7P20853 494 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 EML3Q32P44 896 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 NOMO2Q5JPE7 1267 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 CYP20A1Q6UW02 462 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 CROTQ9UKG9 612 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 NDUFAF1Q9Y375 327 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 KIAA1210Q9ULL0 1709 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 BTBD19C9JJ37 291 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 GLRA2P23416 452 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 SLC22A9Q8IVM8 553 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 OR6Y1Q8NGX8 325 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 TCF7L2Q9NQB0 619 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 SKIV2L2P42285 1042 aaKnown RBP14.53□□□□□ -0.08
TRAF1-201ENST00000373887 TUFMP49411 452 aaKnown RBP14.53□□□□□ -0.08
TRAF1-201ENST00000373887 FOXR1Q6PIV2 292 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 FAM124AQ86V42 546 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 KRT73Q86Y46 540 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 PDCD10Q9BUL8 212 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 NRDE2Q9H7Z3 1164 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 SHOC2Q9UQ13 582 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 CAPN6Q9Y6Q1 641 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 A0A087X0B3 334 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 BCLAF3A2AJT9 711 aaKnown RBP14.53□□□□□ -0.08
TRAF1-201ENST00000373887 B4GALT5O43286 388 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 ITGA9Q13797 1035 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 SPANXN2Q5MJ10 180 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 FKBP1CQ5VVH2 108 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 RAP1GAP2Q684P5 730 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 APLFQ8IW19 511 aaPredicted RBP14.53□□□□□ -0.08
TRAF1-201ENST00000373887 KBTBD2Q8IY47 623 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 IPCEF1Q8WWN9 437 aaPredicted RBP14.53□□□□□ -0.08
TRAF1-201ENST00000373887 CAPNS2Q96L46 248 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 BDH2Q9BUT1 245 aa14.53□□□□□ -0.08
TRAF1-201ENST00000373887 GAKO14976 1311 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 GLTPD2A6NH11 291 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 FKBP6O75344 327 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 IRAK1BP1Q5VVH5 260 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 PMF1Q6P1K2 205 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 TSHZ1Q6ZSZ6 1077 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 SLC26A11Q86WA9 606 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 SUSD6Q92537 303 aa14.52□□□□□ -0.08
TRAF1-201ENST00000373887 ZNF518BQ9C0D4 1074 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms