RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 EDDM13A0A1B0GTR0 161 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 A0A1W2PQM1 296 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 NEMP2A6NFY4 417 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 MSI1O43347 362 aaKnown RBP12.66□□□□□ -0.38
HDAC8-204ENST00000373560 STAU1O95793 577 aaKnown RBP12.66□□□□□ -0.38
HDAC8-204ENST00000373560 RALAP11233 206 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 LIFP15018 202 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 NDST1P52848 882 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 MAPK10P53779 464 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 ST8SIA6P61647 398 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 ZNF284Q2VY69 593 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 BHLHA9Q7RTU4 235 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 ZNF276Q8N554 614 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 PLD4Q96BZ4 506 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 TNIP3Q96KP6 325 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 CGRRF1Q99675 332 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 USB1Q9BQ65 265 aaKnown RBP12.66□□□□□ -0.38
HDAC8-204ENST00000373560 BOCQ9BWV1 1114 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 STIM2Q9P246 746 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 PNMA8BQ9ULN7 279 aaPredicted RBP12.66□□□□□ -0.38
HDAC8-204ENST00000373560 ZFR2Q9UPR6 939 aaKnown RBP12.66□□□□□ -0.38
HDAC8-204ENST00000373560 EXOC7Q9UPT5 735 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 USP3Q9Y6I4 520 aa12.66□□□□□ -0.38
HDAC8-204ENST00000373560 A0A1W2PQU0 124 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 TARSL2A2RTX5 802 aaKnown RBP12.65□□□□□ -0.38
HDAC8-204ENST00000373560 ZNF233A6NK53 670 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 RNF103O00237 685 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 AQP9O43315 295 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 GCATO75600 419 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 CSF2P04141 144 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 CELA2BP08218 269 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-204ENST00000373560 NME1P15531 152 aaKnown RBP12.65□□□□□ -0.38
HDAC8-204ENST00000373560 HNRNPKP61978 463 aaKnown RBP eCLIP12.65□□□□□ -0.38
HDAC8-204ENST00000373560 CCL7P80098 99 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 C1orf61Q13536 156 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 LACTB2Q53H82 288 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-204ENST00000373560 PITRM1Q5JRX3 1037 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 Q6ZSR6 202 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 PTAR1Q7Z6K3 402 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-204ENST00000373560 ABI3BPQ7Z7G0 1075 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 SYCP3Q8IZU3 236 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 SDR16C5Q8N3Y7 309 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.65□□□□□ -0.38
HDAC8-204ENST00000373560 LMX1AQ8TE12 382 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 PDCD6IPQ8WUM4 868 aaKnown RBP12.65□□□□□ -0.38
HDAC8-204ENST00000373560 LARP4BQ92615 738 aaKnown RBP12.65□□□□□ -0.38
HDAC8-204ENST00000373560 CCDC127Q96BQ5 260 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 PRDM9Q9NQV7 894 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 SFMBT1Q9UHJ3 866 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 SALL4Q9UJQ4 1053 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 STOML2Q9UJZ1 356 aa12.65□□□□□ -0.38
HDAC8-204ENST00000373560 TNRC6AQ8NDV7 1962 aaKnown RBP12.64□□□□□ -0.39
HDAC8-204ENST00000373560 POM121BA6NF01 834 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 RNF223E7ERA6 249 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 SPINT1O43278 529 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 PRKAR1AP10644 381 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 TNNI1P19237 187 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 NUDT1P36639 197 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 CASP4P49662 377 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 KLRB1Q12918 225 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 EIF3IQ13347 325 aaKnown RBP12.64□□□□□ -0.39
HDAC8-204ENST00000373560 FGL2Q14314 439 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 FAM133BQ5BKY9 247 aaKnown RBP12.64□□□□□ -0.39
HDAC8-204ENST00000373560 PIK3R6Q5UE93 754 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 NUGGCQ68CJ6 796 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 SEL1L3Q68CR1 1132 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 TADA2BQ86TJ2 420 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 MFN1Q8IWA4 741 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 APCDD1Q8J025 514 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 PLEKHO2Q8TD55 490 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 CCDC74AQ96AQ1 378 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 DNAJC19Q96DA6 116 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 TCTN2Q96GX1 697 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 BMFQ96LC9 184 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 CASS4Q9NQ75 786 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 MED13LQ71F56 2210 aa12.64□□□□□ -0.39
HDAC8-204ENST00000373560 A0A1W2PQ27 194 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 A0A1W2PQ64 194 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 A0A1W2PQC6 194 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 RAD51BO15315 384 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 NKX2-8O15522 239 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 SLC7A4O43246 635 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 KIF20AO95235 890 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 VNN1O95497 513 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 ASLP04424 464 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 RPLP0P05388 317 aaKnown RBP12.63□□□□□ -0.39
HDAC8-204ENST00000373560 CCKBRP32239 447 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 HOXD13P35453 343 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 RPS24P62847 133 aaKnown RBP12.63□□□□□ -0.39
HDAC8-204ENST00000373560 ELAVL3Q14576 367 aaKnown RBP12.63□□□□□ -0.39
HDAC8-204ENST00000373560 ESPL1Q14674 2120 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 BMT2Q1RMZ1 405 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 ZNF699Q32M78 642 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 ADGRF1Q5T601 910 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 PIP5KL1Q5T9C9 394 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 ATP1A1-AS1Q5TC04 95 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 NADSYN1Q6IA69 706 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 CRYBG2Q8N1P7 616 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 KYQ8NBH2 561 aa12.63□□□□□ -0.39
HDAC8-204ENST00000373560 NKD1Q969G9 470 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms