RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 FOXP3Q9BZS1 431 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 TBC1D17Q9HA65 648 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 SYNJ2BP-COX16A0A087WUM0 186 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 MAN2B1O00754 1011 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 ATMINO43313 823 aaPredicted RBP21.01■□□□□ 0.95
SYNC-201ENST00000373484 GPR37L1O60883 481 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 ADH1CP00326 375 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 MYBL1P10243 752 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 RARAP10276 462 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 PYGMP11217 842 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 RFC1P35251 1148 aaPredicted RBP21.01■□□□□ 0.95
SYNC-201ENST00000373484 CHKAP35790 457 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 GAB4Q2WGN9 574 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 ZC3H12AQ5D1E8 599 aaKnown RBP21.01■□□□□ 0.95
SYNC-201ENST00000373484 BNIPLQ7Z465 357 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 CPXM2Q8N436 756 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 RXFP2Q8WXD0 754 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 TBCBQ99426 244 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 MFSD1Q9H3U5 465 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 COX16Q9P0S2 106 aa21.01■□□□□ 0.95
SYNC-201ENST00000373484 FAM86C2PA6NEL3 165 aa21■□□□□ 0.95
SYNC-201ENST00000373484 PDGFRAP16234 1089 aa21■□□□□ 0.95
SYNC-201ENST00000373484 CCND1P24385 295 aa21■□□□□ 0.95
SYNC-201ENST00000373484 NCALDP61601 193 aa21■□□□□ 0.95
SYNC-201ENST00000373484 NME3Q13232 169 aa21■□□□□ 0.95
SYNC-201ENST00000373484 TXNDC11Q6PKC3 985 aa21■□□□□ 0.95
SYNC-201ENST00000373484 ZNF852Q6ZMS4 543 aa21■□□□□ 0.95
SYNC-201ENST00000373484 TMEM25Q86YD3 366 aa21■□□□□ 0.95
SYNC-201ENST00000373484 BBOF1Q8ND07 529 aa21■□□□□ 0.95
SYNC-201ENST00000373484 ARHGEF2Q92974 986 aaKnown RBP21■□□□□ 0.95
SYNC-201ENST00000373484 ZNF653Q96CK0 615 aa21■□□□□ 0.95
SYNC-201ENST00000373484 C1QTNF1Q9BXJ1 281 aa21■□□□□ 0.95
SYNC-201ENST00000373484 PIGVQ9NUD9 493 aa21■□□□□ 0.95
SYNC-201ENST00000373484 PARVAQ9NVD7 372 aa21■□□□□ 0.95
SYNC-201ENST00000373484 BAIAP2L1Q9UHR4 511 aa21■□□□□ 0.95
SYNC-201ENST00000373484 KANSL1LA0AUZ9 987 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 WFS1O76024 890 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 TTC4O95801 387 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 APOEP02649 317 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 SLC2A3P11169 496 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 ADH5P11766 374 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 CD72P21854 359 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 SDC4P31431 198 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 CCR1P32246 355 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 PTPN9P43378 593 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 COPS2P61201 443 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 RPL7AP62424 266 aaKnown RBP20.99■□□□□ 0.95
SYNC-201ENST00000373484 MAMLD1Q13495 774 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 PTK6Q13882 451 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 MESDQ14696 234 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 PPP2R5DQ14738 602 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 CCDC14Q49A88 953 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 ADGRF1Q5T601 910 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 RNF43Q68DV7 783 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 RIBC1Q8N443 379 aaPredicted RBP20.99■□□□□ 0.95
SYNC-201ENST00000373484 ZNF564Q8TBZ8 553 aaPredicted RBP20.99■□□□□ 0.95
SYNC-201ENST00000373484 FAM3CQ92520 227 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 PBXIP1Q96AQ6 731 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 MCEEQ96PE7 176 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 NOP53Q9NZM5 478 aaKnown RBP20.99■□□□□ 0.95
SYNC-201ENST00000373484 MARK1Q9P0L2 795 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 SUFUQ9UMX1 484 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.99■□□□□ 0.95
SYNC-201ENST00000373484 KMT2EQ8IZD2 1858 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 KCNU1A8MYU2 1149 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 HOXC11O43248 304 aaPredicted RBP20.99■□□□□ 0.95
SYNC-201ENST00000373484 SPOPO43791 374 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 ACSL4O60488 711 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 ENDOD1O94919 500 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 F9P00740 461 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 MARCKSL1P49006 195 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 SLC11A2P49281 568 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 VCPP55072 806 aaKnown RBP20.99■□□□□ 0.95
SYNC-201ENST00000373484 GAD2Q05329 585 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 CWF19L1Q69YN2 538 aaKnown RBP20.99■□□□□ 0.95
SYNC-201ENST00000373484 TPGS1Q6ZTW0 290 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 DYDC1Q8WWB3 177 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 SNF8Q96H20 258 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 BTN2A3PQ96KV6 586 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 CDC42EP4Q9H3Q1 356 aaKnown RBP20.99■□□□□ 0.95
SYNC-201ENST00000373484 LTB4R2Q9NPC1 389 aa20.99■□□□□ 0.95
SYNC-201ENST00000373484 GPD1P21695 349 aa20.98■□□□□ 0.95
SYNC-201ENST00000373484 CXCR3P49682 368 aa20.98■□□□□ 0.95
SYNC-201ENST00000373484 DEUP1Q05D60 604 aa20.98■□□□□ 0.95
SYNC-201ENST00000373484 FAM133BQ5BKY9 247 aaKnown RBP20.98■□□□□ 0.95
SYNC-201ENST00000373484 DCUN1D2Q6PH85 259 aa20.98■□□□□ 0.95
SYNC-201ENST00000373484 PPP1R21Q6ZMI0 780 aa20.98■□□□□ 0.95
SYNC-201ENST00000373484 FLCNQ8NFG4 579 aa20.98■□□□□ 0.95
SYNC-201ENST00000373484 FOXQ1Q9C009 403 aa20.98■□□□□ 0.95
SYNC-201ENST00000373484 MRPS17Q9Y2R5 130 aaKnown RBP20.98■□□□□ 0.95
SYNC-201ENST00000373484 SCINQ9Y6U3 715 aa20.98■□□□□ 0.95
SYNC-201ENST00000373484 TMEM120BA0PK00 339 aa20.97■□□□□ 0.95
SYNC-201ENST00000373484 PRR33A8MZF0 331 aa20.97■□□□□ 0.95
SYNC-201ENST00000373484 GFRA2O00451 464 aa20.97■□□□□ 0.95
SYNC-201ENST00000373484 ATP5HO75947 161 aa20.97■□□□□ 0.95
SYNC-201ENST00000373484 UBOX5O94941 541 aa20.97■□□□□ 0.95
SYNC-201ENST00000373484 GAS8O95995 478 aa20.97■□□□□ 0.95
SYNC-201ENST00000373484 MOCS2O96007 188 aaPredicted RBP20.97■□□□□ 0.95
SYNC-201ENST00000373484 OPRD1P41143 372 aa20.97■□□□□ 0.95
SYNC-201ENST00000373484 SLC1A1P43005 524 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms