RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 PGBD3Q8N328 593 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 KAT2BQ92831 832 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 MID1IP1Q9NPA3 183 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 RIPK3Q9Y572 518 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 ARFGEF2Q9Y6D5 1785 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 DYTNA2CJ06 578 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 SLC9A3R1O14745 358 aaPredicted RBP10.65□□□□□ -0.7
NUP188-201ENST00000372577 ZNF23P17027 643 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 NFKB1P19838 968 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 FASP25445 335 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 TUSC3Q13454 348 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 PTPN20Q4JDL3 420 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 ZC3H12AQ5D1E8 599 aaKnown RBP10.65□□□□□ -0.7
NUP188-201ENST00000372577 BHMTQ93088 406 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 POP5Q969H6 163 aaKnown RBP10.65□□□□□ -0.7
NUP188-201ENST00000372577 CATSPER2Q96P56 530 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 PGLYRP2Q96PD5 576 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 PDGFDQ9GZP0 370 aaPredicted RBP10.65□□□□□ -0.7
NUP188-201ENST00000372577 PARVBQ9HBI1 364 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 TMEM39AQ9NV64 488 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 CDV3Q9UKY7 258 aaKnown RBP10.65□□□□□ -0.7
NUP188-201ENST00000372577 ZNF839A8K0R7 811 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 RPN2P04844 631 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 PTPN3P26045 913 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 CHKAP35790 457 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 IL2P60568 153 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 HSDL1Q3SXM5 330 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 FUT11Q495W5 492 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 USP45Q70EL2 814 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 ZNF572Q7Z3I7 529 aaPredicted RBP10.65□□□□□ -0.7
NUP188-201ENST00000372577 DEFB128Q7Z7B8 93 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 CYP4Z1Q86W10 505 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 TMEM159Q96B96 161 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 PHF21BQ96EK2 531 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 SNED1Q8TER0 1413 aa10.65□□□□□ -0.7
NUP188-201ENST00000372577 FGFR1P11362 822 aa10.65□□□□□ -0.71
NUP188-201ENST00000372577 HALP42357 657 aa10.65□□□□□ -0.71
NUP188-201ENST00000372577 FAM98BQ52LJ0 330 aaKnown RBP10.65□□□□□ -0.71
NUP188-201ENST00000372577 MON1AQ86VX9 555 aa10.65□□□□□ -0.71
NUP188-201ENST00000372577 TTC30BQ8N4P2 665 aa10.65□□□□□ -0.71
NUP188-201ENST00000372577 TADA1Q96BN2 335 aa10.65□□□□□ -0.71
NUP188-201ENST00000372577 FAM120BQ96EK7 910 aaKnown RBP10.65□□□□□ -0.71
NUP188-201ENST00000372577 ZNF558Q96NG5 402 aa10.65□□□□□ -0.71
NUP188-201ENST00000372577 HSD3B7Q9H2F3 369 aa10.65□□□□□ -0.71
NUP188-201ENST00000372577 SAE1Q9UBE0 346 aaPredicted RBP10.65□□□□□ -0.71
NUP188-201ENST00000372577 LRCH1Q9Y2L9 728 aa10.65□□□□□ -0.71
NUP188-201ENST00000372577 BCLAF3A2AJT9 711 aaKnown RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 MRASO14807 208 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 KPNA5O15131 536 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 MDM4O15151 490 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 MAP3K13O43283 966 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 RGS14O43566 566 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 PQBP1O60828 265 aaKnown RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 UNC5CO95185 931 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 PIGRP01833 764 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 ERVK-10P10266 1014 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 ERCC2P18074 760 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 KLRC2P26717 231 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 PTPN9P43378 593 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 GABRB2P47870 512 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 RUNX1T1Q06455 604 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 DRICH1Q6PGQ1 229 aaPredicted RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 PIWIL4Q7Z3Z4 852 aaKnown RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 TRABD2AQ86V40 505 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 EXOC3L1Q86VI1 746 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 TRIM48Q8IWZ4 208 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 CAAP1Q9H8G2 361 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 EIF4E1BA6NMX2 242 aaKnown RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 M0R3G1 203 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 IFRD1O00458 451 aaPredicted RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 CALCAP01258 141 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 RAG1P15918 1043 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 GOT1P17174 413 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 DRD4P21917 467 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 RRM2P31350 389 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 TTPAP49638 278 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 NCALDP61601 193 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 CHADLQ6NUI6 762 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 DHFR2Q86XF0 187 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 PTCD2Q8WV60 388 aaKnown RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 CNBD2Q96M20 576 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 MRPL57Q9BQC6 102 aaKnown RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 FAM126AQ9BYI3 521 aaPredicted RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 PDZD7Q9H5P4 517 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 EPS8L2Q9H6S3 715 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 COL20A1Q9P218 1284 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 HES2Q9Y543 173 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 A0A0G2JLL6 359 aaPredicted RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 QSOX1O00391 747 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 VSTM1Q6UX27 236 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 CRELD2Q6UXH1 353 aaPredicted RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 ZBTB49Q6ZSB9 765 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 PRRT2Q7Z6L0 340 aaPredicted RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 SH3GL2Q99962 352 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 MRPL45Q9BRJ2 306 aaKnown RBP10.64□□□□□ -0.71
NUP188-201ENST00000372577 BDH2Q9BUT1 245 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 ATXN3LQ9H3M9 355 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 WDR41Q9HAD4 459 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 IMPAD1Q9NX62 359 aa10.64□□□□□ -0.71
NUP188-201ENST00000372577 BTBD7Q9P203 1132 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms