RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 PQLC3Q8N755 202 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 IL17RCQ8NAC3 791 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 OR7D4Q8NG98 312 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 ALG3Q92685 438 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 PSMB7Q99436 277 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 C11orf16Q9NQ32 467 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 ETNK2Q9NVF9 386 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 VPS51Q9UID3 782 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 ERVW-1Q9UQF0 538 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 RAD54BQ9Y620 910 aa15.9■□□□□ 0.14
PRPF38B-202ENST00000370022 hCG_1818297A0A087WSY0 165 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 USP27XA6NNY8 438 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 CBX4O00257 560 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 APOL1O14791 398 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 KDELR3O43731 214 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 NTSR1P30989 418 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 ACVRL1P37023 503 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 CLCN6P51797 869 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 SERINC3Q13530 473 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 ZNF234Q14588 700 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 EMC10Q5UCC4 262 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 SYT13Q7L8C5 426 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 METTL3Q86U44 580 aaKnown RBP15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 RFX6Q8HWS3 928 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 SORCS1Q8WY21 1168 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 HMCESQ96FZ2 354 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 SLC39A8Q9C0K1 460 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 HCN2Q9UL51 889 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 SLC8A2Q9UPR5 921 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 HS3ST2Q9Y278 367 aa15.89■□□□□ 0.13
PRPF38B-202ENST00000370022 ZMPSTE24O75844 475 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 MX2P20592 715 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 NUBP1P53384 320 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 FNDC3BQ53EP0 1204 aaKnown RBP15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 ZNF569Q5MCW4 686 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 BZW1Q7L1Q6 419 aaKnown RBP15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 ZNF354CQ86Y25 554 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 ARHGAP12Q8IWW6 846 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 ALLCQ8N6M5 410 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 CYB5D2Q8WUJ1 264 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 CASKIN2Q8WXE0 1202 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 CELF6Q96J87 481 aaKnown RBP15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 MRGPRX3Q96LB0 322 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 GABRG3Q99928 467 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 CARD9Q9H257 536 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 TMEM245Q9H330 911 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 MMP17Q9ULZ9 603 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 STON1Q9Y6Q2 735 aa15.88■□□□□ 0.13
PRPF38B-202ENST00000370022 FAM86C2PA6NEL3 165 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 DFFAO00273 331 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 SNAP91O60641 907 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 KLF8O95600 359 aaPredicted RBP15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 PYGMP11217 842 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 TGM2P21980 687 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 CTSOP43234 321 aaPredicted RBP15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 NR2C2P49116 596 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 PAPOLAP51003 745 aaKnown RBP15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 CCR3P51677 355 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 GAS6Q14393 721 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 SERPINA13PQ6UXR4 307 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 PLD5Q8N7P1 536 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 TMEM105Q8N8V8 129 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 TXNDC5Q8NBS9 432 aaKnown RBP15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 TLR10Q9BXR5 811 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 OSBPL8Q9BZF1 889 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 SUN2Q9UH99 717 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 MFSD11O43934 449 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 CST8O60676 142 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 TJP3O95049 919 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 KRT10P13645 584 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 AVPR2P30518 371 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 IL12RB1P42701 662 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 SERPINH1P50454 418 aaKnown RBP15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 ARF5P84085 180 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 IL10RBQ08334 325 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 GALNT2Q10471 571 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 MTAPQ13126 283 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 INO80DQ53TQ3 878 aaPredicted RBP15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 KAZNQ674X7 775 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 BBS12Q6ZW61 710 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 SLC35F6Q8N357 371 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 SH2D3CQ8N5H7 860 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 MYO19Q96H55 970 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 RPL10LQ96L21 214 aaKnown RBP15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 ACOX2Q99424 681 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 CEP44Q9C0F1 390 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 CACNA2D2Q9NY47 1150 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 IPO11Q9UI26 975 aaKnown RBP15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 MFHAS1Q9Y4C4 1052 aa15.87■□□□□ 0.13
PRPF38B-202ENST00000370022 SGK1O00141 431 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 ATP9BO43861 1147 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 PRAMEF11O60813 436 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 ADAM23O75077 832 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 PAPSS2O95340 614 aaPredicted RBP15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 HOXB2P14652 356 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 GLDCP23378 1020 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 CXCL12P48061 93 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 STK19P49842 368 aaPredicted RBP15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 DNA2P51530 1060 aa15.86■□□□□ 0.13
PRPF38B-202ENST00000370022 DGKEP52429 567 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms