RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 HCAR3P49019 387 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 MRPS35P82673 323 aaKnown RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 PRKAA1Q13131 559 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 TAF5Q15542 800 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 QPCTQ16769 361 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 TIGD5Q53EQ6 642 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 ZNF470Q6ECI4 717 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 GDF6Q6KF10 455 aaPredicted RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 NEPROQ6NW34 567 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 TMEM154Q6P9G4 183 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 CLEC20AQ6ZU45 233 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 CPNE8Q86YQ8 564 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 DNAJC9Q8WXX5 260 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 KCNN1Q92952 543 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 MS4A4AQ96JQ5 239 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 FGD4Q96M96 766 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 RNF39Q9H2S5 420 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 HIPK3Q9H422 1215 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 LATS2Q9NRM7 1088 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 RIC8BQ9NVN3 520 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 KCNK4Q9NYG8 393 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 ADA2Q9NZK5 511 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 VTI1BQ9UEU0 232 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 CRLS1Q9UJA2 301 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC25A13Q9UJS0 675 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 NUDT5Q9UKK9 219 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 A0A087X1B8 175 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 E2F8A0AVK6 867 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 ZNF197O14709 1029 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 CASQ2O14958 399 aaPredicted RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 TLR5O60602 858 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 USP12O75317 370 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 SNUPNO95149 360 aaKnown RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 ZNF865P0CJ78 1059 aaPredicted RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 THRAP10827 490 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 CCNCP24863 283 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 IL1R2P27930 398 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 PTPN4P29074 926 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 HMOX2P30519 316 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 GJA5P36382 358 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 MAPK8P45983 427 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 YBEYP58557 167 aaPredicted RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 STX5Q13190 355 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 OASLQ15646 514 aaKnown RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 KCTD19Q17RG1 926 aaPredicted RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 MORN1Q5T089 497 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 RAP1GAP2Q684P5 730 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 RNF43Q68DV7 783 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 ADGRD1Q6QNK2 874 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 METTL3Q86U44 580 aaKnown RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 MTDHQ86UE4 582 aaKnown RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 YAF2Q8IY57 180 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 CCDC185Q8N715 623 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 PTCD2Q8WV60 388 aaKnown RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 USP6NLQ92738 828 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 TMA16Q96EY4 203 aaKnown RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 SUSD3Q96L08 255 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 HAPLN2Q9GZV7 340 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 CACYBPQ9HB71 228 aaKnown RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 NMRAL1Q9HBL8 299 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 CD274Q9NZQ7 290 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 DLGAP2Q9P1A6 1054 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 ARHGAP26Q9UNA1 814 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 SORCS3Q9UPU3 1222 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 MBLAC1A4D2B0 266 aaPredicted RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 ANGPT2O15123 496 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 NVLO15381 856 aaKnown RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 GPR32O75388 356 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 INHAP05111 366 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 KRT16P08779 473 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 TPBGLP0DKB5 382 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 ERVK-10P10266 1014 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 RHOQP17081 205 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 TARSP26639 723 aaKnown RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 KLRC2P26717 231 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 AKT1P31749 480 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 RANBP1P43487 201 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC1A6P48664 564 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 GSCP56915 257 aaPredicted RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 OGDHQ02218 1023 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 RASA2Q15283 850 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 DDR2Q16832 855 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 GRAMD1BQ3KR37 738 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 SERINC5Q86VE9 423 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 NPAS4Q8IUM7 802 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 TMEM199Q8N511 208 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 TEX9Q8N6V9 391 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 CATSPER1Q8NEC5 780 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 SPDYE1Q8NFV5 336 aaPredicted RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 DTX3LQ8TDB6 740 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 NAF1Q96HR8 494 aaKnown RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 FOPNLQ96NB1 174 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 HAUS8Q9BT25 410 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 C2orf49Q9BVC5 232 aaPredicted RBP5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 GLOD4Q9HC38 313 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 PNPLA8Q9NP80 782 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 ABCF3Q9NUQ8 709 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 FAM8A1Q9UBU6 413 aa5.41□□□□□ -1.54
SMNDC1-202ENST00000369603 NENFQ9UMX5 172 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms