RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 HCRTO43612 131 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 TBC1D4O60343 1298 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 LILRB5O75023 590 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 TBX10O75333 385 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 RNF8O76064 485 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 KRT7P08729 469 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 ACAT1P24752 427 aaKnown RBP9.07□□□□□ -0.96
TPM3-213ENST00000368545 TKTP29401 623 aaKnown RBP9.07□□□□□ -0.96
TPM3-213ENST00000368545 CD68P34810 354 aaPredicted RBP9.07□□□□□ -0.96
TPM3-213ENST00000368545 CTNNB1P35222 781 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 GRIK1P39086 918 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 MTHFRP42898 656 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 SSR1P43307 286 aaKnown RBP9.07□□□□□ -0.96
TPM3-213ENST00000368545 SLC6A3Q01959 620 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 GRM3Q14832 879 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 MDH1BQ5I0G3 518 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 CC2D1AQ6P1N0 951 aaPredicted RBP9.07□□□□□ -0.96
TPM3-213ENST00000368545 TMCO3Q6UWJ1 677 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 MTDHQ86UE4 582 aaKnown RBP9.07□□□□□ -0.96
TPM3-213ENST00000368545 CPNE8Q86YQ8 564 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 FUKQ8N0W3 1084 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 KCT2Q8NC54 265 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 DNAJB8Q8NHS0 232 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 CCDC26Q8TAB7 109 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 JOSD2Q8TAC2 188 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 TOP1MTQ969P6 601 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 CLIP3Q96DZ5 547 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 MED10Q9BTT4 135 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 THG1LQ9NWX6 298 aaKnown RBP9.07□□□□□ -0.96
TPM3-213ENST00000368545 PNMA8BQ9ULN7 279 aaPredicted RBP9.07□□□□□ -0.96
TPM3-213ENST00000368545 COQ6Q9Y2Z9 468 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 NLRC5Q86WI3 1866 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 DDHD2O94830 711 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 ZRANB2O95218 330 aaKnown RBP eCLIP9.07□□□□□ -0.96
TPM3-213ENST00000368545 GPD1P21695 349 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 TNFRSF8P28908 595 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 PCK1P35558 622 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 BRCC3P46736 316 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 RGS7P49802 495 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 TSPY1Q01534 308 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 OGDHQ02218 1023 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 ODF1Q14990 250 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 PAN2Q504Q3 1202 aaKnown RBP9.07□□□□□ -0.96
TPM3-213ENST00000368545 ODF2Q5BJF6 829 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 CD300LGQ6UXG3 332 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 MAATS1Q7Z4T9 603 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 SLC13A5Q86YT5 568 aaPredicted RBP9.07□□□□□ -0.96
TPM3-213ENST00000368545 KREMEN2Q8NCW0 462 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 MYCBPAPQ8TBZ2 947 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 HASPINQ8TF76 798 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 SMARCD1Q96GM5 515 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 AHCYL2Q96HN2 611 aaKnown RBP9.07□□□□□ -0.96
TPM3-213ENST00000368545 PNKPQ96T60 521 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 KRT12Q99456 494 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 CNPY3Q9BT09 278 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 LRRC1Q9BTT6 524 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 AP1M1Q9BXS5 423 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 EPC1Q9H2F5 836 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 NCDNQ9UBB6 729 aa9.07□□□□□ -0.96
TPM3-213ENST00000368545 C2CD4BA6NLJ0 364 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 F8VP50 259 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 TULP2O00295 520 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 SLC30A4O14863 429 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 PAPSS1O43252 624 aaPredicted RBP9.06□□□□□ -0.96
TPM3-213ENST00000368545 PHF2O75151 1096 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 CPP00450 1065 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 IGFBP6P24592 240 aaPredicted RBP9.06□□□□□ -0.96
TPM3-213ENST00000368545 CHRNA3P32297 505 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 OR1G1P47890 313 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 TAS2R40P59535 323 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 VSNL1P62760 191 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 YWHAHQ04917 246 aaPredicted RBP9.06□□□□□ -0.96
TPM3-213ENST00000368545 KLF1Q13351 362 aaPredicted RBP9.06□□□□□ -0.96
TPM3-213ENST00000368545 SMC1AQ14683 1233 aaKnown RBP9.06□□□□□ -0.96
TPM3-213ENST00000368545 GRAMD1BQ3KR37 738 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 EFHC1Q5JVL4 640 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 CLEC20AQ6ZU45 233 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 SLC26A9Q7LBE3 791 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 ZNF280BQ86YH2 543 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 KLHL7Q8IXQ5 586 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 RCOR2Q8IZ40 523 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 C12orf50Q8NA57 414 aaPredicted RBP9.06□□□□□ -0.96
TPM3-213ENST00000368545 CHTF18Q8WVB6 975 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 PCED1BQ96HM7 432 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 LRGUKQ96M69 825 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 CASD1Q96PB1 797 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 UBXN6Q9BZV1 441 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 FOXQ1Q9C009 403 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 ATXN3LQ9H3M9 355 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 ARFGAP3Q9NP61 516 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 HOMER3Q9NSC5 361 aa9.06□□□□□ -0.96
TPM3-213ENST00000368545 TIMM13Q9Y5L4 95 aaPredicted RBP9.06□□□□□ -0.96
TPM3-213ENST00000368545 SYN3O14994 580 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 SART1O43290 800 aaKnown RBP9.05□□□□□ -0.96
TPM3-213ENST00000368545 ATP2C2O75185 946 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 LRCH4O75427 683 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 HEXIM1O94992 359 aaKnown RBP9.05□□□□□ -0.96
TPM3-213ENST00000368545 PDGFRAP16234 1089 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 SDC4P31431 198 aa9.05□□□□□ -0.96
TPM3-213ENST00000368545 PTPN7P35236 360 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms