RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 SRRM3A6NNA2 597 aaPredicted RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 XPO1O14980 1071 aaKnown RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 DAPK3O43293 454 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 RNF8O76064 485 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 RTN3O95197 1032 aaPredicted RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 FAM200BP0CF97 657 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 IL1R2P27930 398 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 MIPP30301 263 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 CHRNA3P32297 505 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 COILP38432 576 aaPredicted RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 TUBP50607 506 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 ZNF143P52747 638 aaPredicted RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 SLC8A3P57103 927 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 SNX16P57768 344 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 FAM193AP78312 1265 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 SLC25A11Q02978 314 aaKnown RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 GAD2Q05329 585 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 IFRD2Q12894 506 aaPredicted RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 HLTFQ14527 1009 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM3-210ENST00000368530 HADHQ16836 314 aaKnown RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 HECTD3Q5T447 861 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 CCDC137Q6PK04 289 aaKnown RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 SPOCD1Q6ZMY3 1216 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 HDXQ7Z353 690 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 PIGZQ86VD9 579 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 RCOR2Q8IZ40 523 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 PDZD8Q8NEN9 1154 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 FNIP1Q8TF40 1166 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 AENQ8WTP8 325 aaKnown RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 STK32AQ8WU08 396 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 NDRG1Q92597 394 aaKnown RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 HSPH1Q92598 858 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 FBXO32Q969P5 355 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 P2RY11Q96G91 374 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 RBM41Q96IZ5 413 aaKnown RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 CFAP57Q96MR6 1250 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 ACOX2Q99424 681 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 CNPY3Q9BT09 278 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 NUSAP1Q9BXS6 441 aaKnown RBP10.28□□□□□ -0.76
TPM3-210ENST00000368530 DUSP16Q9BY84 665 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 FUT8Q9BYC5 575 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 SPHK2Q9NRA0 654 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 ASNSD1Q9NWL6 643 aa10.28□□□□□ -0.76
TPM3-210ENST00000368530 CACNA1EQ15878 2313 aa10.27□□□□□ -0.76
TPM3-210ENST00000368530 MYOFQ9NZM1 2061 aa10.27□□□□□ -0.76
TPM3-210ENST00000368530 ATRXP46100 2492 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 GON4LQ3T8J9 2241 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 PCNX2A6NKB5 2137 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 TBC1D3BA6NDS4 549 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 TMEM8BA6NDV4 472 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.27□□□□□ -0.77
TPM3-210ENST00000368530 HYAL3O43820 417 aaPredicted RBP10.27□□□□□ -0.77
TPM3-210ENST00000368530 AP1G2O75843 785 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 TNFRSF8P28908 595 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 HOXD12P35452 270 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 CETN2P41208 172 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 PTGIRP43119 386 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 MAPK8P45983 427 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 PLA2G4AP47712 749 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 SLC5A3P53794 718 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 ADIGQ0VDE8 80 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 CASP8Q14790 479 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 PPP2R5EQ16537 467 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 CCDC14Q49A88 953 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 LRRC38Q5VT99 294 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 LYSMD4Q5XG99 296 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 SCYL2Q6P3W7 929 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 HTR3DQ70Z44 454 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 FAM35AQ86V20 835 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 JAMLQ86YT9 394 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 SLC41A1Q8IVJ1 513 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 DEFB119Q8N690 84 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 ZNF513Q8N8E2 541 aaPredicted RBP10.27□□□□□ -0.77
TPM3-210ENST00000368530 TERB1Q8NA31 727 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 MAIP1Q8WWC4 291 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 SPACA7Q96KW9 195 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 PEBP4Q96S96 227 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 SMOQ99835 787 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 CSNK1G1Q9HCP0 422 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 DDX56Q9NY93 547 aaKnown RBP10.27□□□□□ -0.77
TPM3-210ENST00000368530 DEC1Q9P2X7 70 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 KLK13Q9UKR3 277 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 SLC6A14Q9UN76 642 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 UTP11Q9Y3A2 253 aaKnown RBP10.27□□□□□ -0.77
TPM3-210ENST00000368530 NEUROG3Q9Y4Z2 214 aa10.27□□□□□ -0.77
TPM3-210ENST00000368530 ATXN2Q99700 1313 aaKnown RBP10.27□□□□□ -0.77
TPM3-210ENST00000368530 DSPP15924 2871 aaKnown RBP10.26□□□□□ -0.77
TPM3-210ENST00000368530 PLXND1Q9Y4D7 1925 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 IGHV1OR15-9A0A0B4J2B8 117 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 SPAARA0A1B0GVQ0 90 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 FAM187AA6NFU0 413 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 PRRT4C9JH25 899 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 TAF4O00268 1085 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 GJB3O75712 270 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 TRUB2O95900 331 aaKnown RBP10.26□□□□□ -0.77
TPM3-210ENST00000368530 TBX18O95935 607 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 SERPINF2P08697 491 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 KRT7P08729 469 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 FAM153BP0C7A2 387 aa10.26□□□□□ -0.77
TPM3-210ENST00000368530 CD59P13987 128 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms