RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ZNF783Q6ZMS7 281 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 FRMD1Q8N878 549 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 KDM1BQ8NB78 822 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 NETO2Q8NC67 525 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 RLN3Q8WXF3 142 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 ACE2Q9BYF1 805 aaPredicted RBP15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 GOLPH3Q9H4A6 298 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 RETREG1Q9H6L5 497 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 TRMT1Q9NXH9 659 aaKnown RBP15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 SLC25A13Q9UJS0 675 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 MFHAS1Q9Y4C4 1052 aa15.44■□□□□ 0.06
SMPDL3A-201ENST00000368440 K7ERQ8 282 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 CBX4O00257 560 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 FGF10O15520 208 aaPredicted RBP15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 RAMP2O60895 175 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 SIN3BO75182 1162 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 SRCP12931 536 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 ERCC2P18074 760 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 HTR7P34969 479 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 NOP2P46087 812 aaKnown RBP15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 KRT83P78385 493 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 ARF5P84085 180 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 DPYSQ14117 519 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 HADHQ16836 314 aaKnown RBP15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 IL31Q6EBC2 164 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 POLNQ7Z5Q5 900 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 SH2D3CQ8N5H7 860 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 CCDC112Q8NEF3 446 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 FRS2Q8WU20 508 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 PTPRN2Q92932 1015 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 C2orf49Q9BVC5 232 aaPredicted RBP15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 LACRTQ9GZZ8 138 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 KLC2Q9H0B6 622 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 ETNK2Q9NVF9 386 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 DUSP10Q9Y6W6 482 aa15.43■□□□□ 0.06
SMPDL3A-201ENST00000368440 DAPK3O43293 454 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 SMAD6O43541 496 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 ARHGAP25P42331 645 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 ARSEP51690 589 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 HADHBP55084 474 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 MMRN1Q13201 1228 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 POLD3Q15054 466 aaPredicted RBP15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 C9orf64Q5T6V5 341 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 KIAA1324Q6UXG2 1013 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 TMPRSS6Q8IU80 811 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 FAM160A2Q8N612 972 aaPredicted RBP15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 NPWQ8N729 165 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 GAB3Q8WWW8 586 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 TSC1Q92574 1164 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 CELF6Q96J87 481 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 MAGEH1Q9H213 219 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 LUC7LQ9NQ29 371 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 SUN2Q9UH99 717 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 LCMT1Q9UIC8 334 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 HS3ST2Q9Y278 367 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 NUP205Q92621 2012 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 RASA4BC9J798 803 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 H3BRJ5 948 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 RASA4O43374 803 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 ATP9BO43861 1147 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 BUB1BO60566 1050 aaPredicted RBP15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 RPP40O75818 363 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 IPO7O95373 1038 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 CD160O95971 181 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 AMPD1P23109 780 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 HCAR3P49019 387 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 VAV2P52735 878 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 CDH6P55285 790 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 LPAL2Q16609 132 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 LEKR1Q6ZMV7 388 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 TP53INP2Q8IXH6 220 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 UMODL1-AS1Q8N2C9 162 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 OR2T3Q8NH03 318 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 FAM71BQ8TC56 605 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 HMCESQ96FZ2 354 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 CSPG4P5Q96PW8 444 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 EPC1Q9H2F5 836 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 PRDM16Q9HAZ2 1276 aa15.42■□□□□ 0.06
SMPDL3A-201ENST00000368440 A0A0A6YYK5 440 aaPredicted RBP15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 EDDM13A0A1B0GTR0 161 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 USP27XA6NNY8 438 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 PROB1E7EW31 1015 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 BUB1O43683 1085 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 ZNF500O60304 480 aaPredicted RBP15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 BCKDHBP21953 392 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 COMTP21964 271 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 IL4RP24394 825 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 NNMTP40261 264 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 ARL4AP40617 200 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 P2RY2P41231 377 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 VASPP50552 380 aaPredicted RBP15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 DPYSL3Q14195 570 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 KRT81Q14533 505 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 DLG2Q15700 870 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 MAP7D1Q3KQU3 841 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 ACCSLQ4AC99 568 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 PRR23BQ6ZRT6 265 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 Q6ZVU0 165 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 ARHGAP12Q8IWW6 846 aa15.41■□□□□ 0.06
SMPDL3A-201ENST00000368440 STK40Q8N2I9 435 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms