RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 MEI4A8MW99 385 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 ATMINO43313 823 aaPredicted RBP19.42■□□□□ 0.7
CKS1B-203ENST00000368439 RNASEH1O60930 286 aaKnown RBP19.42■□□□□ 0.7
CKS1B-203ENST00000368439 ZMPSTE24O75844 475 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 LRIG2O94898 1065 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 SEMA4FO95754 770 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 CFIP05156 583 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 PLEKP08567 350 aaPredicted RBP19.42■□□□□ 0.7
CKS1B-203ENST00000368439 SRCP12931 536 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 GLDCP23378 1020 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 SLC8A1P32418 973 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 KRT83P78385 493 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 IL31Q6EBC2 164 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 ZNF783Q6ZMS7 281 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 AADATQ8N5Z0 425 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 OR7D4Q8NG98 312 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 SYN2Q92777 582 aaPredicted RBP19.42■□□□□ 0.7
CKS1B-203ENST00000368439 FAM131CQ96AQ9 280 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 CNPY3Q9BT09 278 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 C2orf49Q9BVC5 232 aaPredicted RBP19.42■□□□□ 0.7
CKS1B-203ENST00000368439 SGK2Q9HBY8 427 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 FBXL12Q9NXK8 326 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 IFNKQ9P0W0 207 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 ADAMTS1Q9UHI8 967 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 SLCO1B1Q9Y6L6 691 aa19.42■□□□□ 0.7
CKS1B-203ENST00000368439 PLXNA2O75051 1894 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 A0A1W2PP55 124 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 K7ERQ8 282 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 FTLP02792 175 aaPredicted RBP19.41■□□□□ 0.7
CKS1B-203ENST00000368439 METAP1P53582 386 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 SLFN11Q7Z7L1 901 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 PYROXD2Q8N2H3 581 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 ORAI3Q9BRQ5 295 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 NEUROG2Q9H2A3 272 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 RETREG1Q9H6L5 497 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 PARVAQ9NVD7 372 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 TMEM248Q9NWD8 314 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 SUSD2Q9UGT4 822 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 FZD10Q9ULW2 581 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 CAPN11Q9UMQ6 739 aa19.41■□□□□ 0.7
CKS1B-203ENST00000368439 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.41■□□□□ 0.7
CKS1B-203ENST00000368439 NCOR2Q9Y618 2525 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 TMEM191CA6NGB0 347 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 ARHGAP33O14559 1287 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 SMAD6O43541 496 aaKnown RBP19.4■□□□□ 0.7
CKS1B-203ENST00000368439 RTN2O75298 545 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 ADH1BP00325 375 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 GYPCP04921 128 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 RHOQP17081 205 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 C5AR1P21730 350 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 DRD3P35462 400 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 PSMD8P48556 350 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 ZBED6P86452 979 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 GNA12Q03113 381 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 ZNF252P-AS1Q0IIN9 211 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 ACCSLQ4AC99 568 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 DCUN1D2Q6PH85 259 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 Q6ZVU0 165 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 DRC7Q8IY82 874 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 ARFGAP1Q8N6T3 406 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 BIRC7Q96CA5 298 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 ACE2Q9BYF1 805 aaPredicted RBP19.4■□□□□ 0.7
CKS1B-203ENST00000368439 XPO4Q9C0E2 1151 aaKnown RBP19.4■□□□□ 0.7
CKS1B-203ENST00000368439 ISCUQ9H1K1 167 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 EIF2B4Q9UI10 523 aaKnown RBP19.4■□□□□ 0.7
CKS1B-203ENST00000368439 SARDHQ9UL12 918 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 PPM1HQ9ULR3 514 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 FZD4Q9ULV1 537 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 NCKAP1Q9Y2A7 1128 aa19.4■□□□□ 0.7
CKS1B-203ENST00000368439 A0A1B0GTW7 788 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 ANKRD62A6NC57 917 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 MCF2LO15068 1137 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 ALOX15BO15296 676 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 ZNF821O75541 412 aaPredicted RBP19.39■□□□□ 0.69
CKS1B-203ENST00000368439 CD160O95971 181 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 IGHV4-34P06331 123 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 GOT1P17174 413 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 L1CAMP32004 1257 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 MAPKAPK2P49137 400 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 GALCP54803 685 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 ARF5P84085 180 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 GFPT1Q06210 699 aaPredicted RBP19.39■□□□□ 0.69
CKS1B-203ENST00000368439 SEMA3BQ13214 749 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 PPM1JQ5JR12 505 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 LINGO4Q6UY18 593 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 TMC6Q7Z403 805 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 ZCCHC9Q8N567 271 aaKnown RBP19.39■□□□□ 0.69
CKS1B-203ENST00000368439 OR8D1Q8WZ84 308 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 TBC1D31Q96DN5 1066 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 IQCDQ96DY2 449 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 TRIM7Q9C029 511 aa19.39■□□□□ 0.69
CKS1B-203ENST00000368439 RNASEH2AO75792 299 aaKnown RBP19.38■□□□□ 0.69
CKS1B-203ENST00000368439 IL1BP01584 269 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 CTSLP07711 333 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 GNSP15586 552 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 ACVRL1P37023 503 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 MAPK8P45983 427 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 CLCN6P51797 869 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 AIF1P55008 147 aa19.38■□□□□ 0.69
CKS1B-203ENST00000368439 BNC1Q01954 994 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms