RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 FATE1Q969F0 183 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 AGAP3Q96P47 875 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 CEP41Q9BYV8 373 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 STN1Q9H668 368 aaKnown RBP14.3□□□□□ -0.12
USF1-202ENST00000368020 UGT1A7Q9HAW7 530 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 UGT1A10Q9HAW8 530 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 UGT1A8Q9HAW9 530 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 OLA1Q9NTK5 396 aaKnown RBP14.3□□□□□ -0.12
USF1-202ENST00000368020 COMMD8Q9NX08 183 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 LNPEPQ9UIQ6 1025 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 SOX13Q9UN79 622 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 RPL26L1Q9UNX3 145 aaKnown RBP14.3□□□□□ -0.12
USF1-202ENST00000368020 TLR6Q9Y2C9 796 aa14.3□□□□□ -0.12
USF1-202ENST00000368020 WASH4PA8MWX3 477 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 PAGE1O75459 146 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 DLDP09622 509 aaKnown RBP14.29□□□□□ -0.12
USF1-202ENST00000368020 NFKB1P19838 968 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 CD68P34810 354 aaPredicted RBP14.29□□□□□ -0.12
USF1-202ENST00000368020 MNAT1P51948 309 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 RABGGTBP53611 331 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 GEMP55040 296 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 ZBTB17Q13105 803 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 PPIGQ13427 754 aaKnown RBP eCLIP14.29□□□□□ -0.123e-6■■■■□ 19.3
USF1-202ENST00000368020 CCDC153Q494R4 210 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 SLC39A12Q504Y0 691 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 CDHR3Q6ZTQ4 885 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 CLNKQ7Z7G1 428 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 SCAMP5Q8TAC9 235 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 ZNF669Q96BR6 464 aaPredicted RBP14.29□□□□□ -0.12
USF1-202ENST00000368020 FCRL5Q96RD9 977 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 RBBP8Q99708 897 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 WWP1Q9H0M0 922 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 IL23AQ9NPF7 189 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 TBC1D13Q9NVG8 400 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 THAP1Q9NVV9 213 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 MID2Q9UJV3 735 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 PCDHB5Q9Y5E4 795 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 NR2E3Q9Y5X4 410 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 CEP290O15078 2479 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 A0A0G2JND7 137 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.29□□□□□ -0.12
USF1-202ENST00000368020 CCDC85CA6NKD9 419 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 MATN3O15232 486 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 HOXA2O43364 376 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 BAIAP3O94812 1187 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 HAUS5O94927 633 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 RTN3O95197 1032 aaPredicted RBP14.29□□□□□ -0.12
USF1-202ENST00000368020 ATP6V1G2O95670 118 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 ALDOAP04075 364 aaKnown RBP14.29□□□□□ -0.12
USF1-202ENST00000368020 MPOP05164 745 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 ITGB1P05556 798 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 IBSPP21815 317 aaPredicted RBP14.29□□□□□ -0.12
USF1-202ENST00000368020 GRK2P25098 689 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 TYK2P29597 1187 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 LIMK2P53671 638 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 CRADDP78560 199 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 ZBTB16Q05516 673 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 CHI3L2Q15782 390 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 TBCCQ15814 346 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 TCTN1Q2MV58 587 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 ANKRD20A4Q4UJ75 823 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 PDPK2PQ6A1A2 396 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 ABI1Q8IZP0 508 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 RTL3Q8N8U3 475 aaKnown RBP14.29□□□□□ -0.12
USF1-202ENST00000368020 PPP1R14CQ8TAE6 165 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 GABPB2Q8TAK5 448 aaPredicted RBP14.29□□□□□ -0.12
USF1-202ENST00000368020 FCRL2Q96LA5 508 aaPredicted RBP14.29□□□□□ -0.12
USF1-202ENST00000368020 TMEM209Q96SK2 561 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 IL12RB2Q99665 862 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 GORASP1Q9BQQ3 440 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 NEU3Q9UQ49 428 aa14.29□□□□□ -0.12
USF1-202ENST00000368020 LTBP2Q14767 1821 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 KCNU1A8MYU2 1149 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 F5H423 210 aaPredicted RBP14.28□□□□□ -0.12
USF1-202ENST00000368020 DFFAO00273 331 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 TPP1O14773 563 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 SNNO75324 88 aaPredicted RBP14.28□□□□□ -0.12
USF1-202ENST00000368020 TADA2AO75478 443 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 WFS1O76024 890 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 NEBLO76041 1014 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 JCHAINP01591 159 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 DNAJB1P25685 340 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 MAGEA12P43365 314 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 OR1G1P47890 313 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 POLD2P49005 469 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 OCRLQ01968 901 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 ELAVL2Q12926 359 aaKnown RBP14.28□□□□□ -0.12
USF1-202ENST00000368020 STX3Q13277 289 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 KRT72Q14CN4 511 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 UGP2Q16851 508 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 TAF1BQ53T94 588 aaPredicted RBP14.28□□□□□ -0.12
USF1-202ENST00000368020 CLLU1OSQ5K130 101 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 ZNF280DQ6N043 979 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 NPAS4Q8IUM7 802 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 SCN4BQ8IWT1 228 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 C7orf61Q8IZ16 206 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 THOC1Q96FV9 657 aaKnown RBP14.28□□□□□ -0.12
USF1-202ENST00000368020 MLPHQ9BV36 600 aaPredicted RBP14.28□□□□□ -0.12
USF1-202ENST00000368020 TMEM120AQ9BXJ8 343 aa14.28□□□□□ -0.12
USF1-202ENST00000368020 SIK2Q9H0K1 926 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms