RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 C17orf99Q6UX52 265 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 CPLX4Q7Z7G2 160 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 NEK8Q86SG6 692 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 UEVLDQ8IX04 471 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 AMER2Q8N7J2 671 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 CCDC89Q8N998 374 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 ETNPPLQ8TBG4 499 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 SARAFQ96BY9 339 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 RSRC1Q96IZ7 334 aaKnown RBP4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 RITA1Q96K30 269 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 ADAD1Q96M93 576 aaKnown RBP4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 LBHD1Q9BQE6 289 aaPredicted RBP4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 DUSP26Q9BV47 211 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 BRF2Q9HAW0 419 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 CPNE5Q9HCH3 593 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 NSMCE4AQ9NXX6 385 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 MPP6Q9NZW5 540 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 UPB1Q9UBR1 384 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 SERGEFQ9UGK8 458 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 MYRFQ9Y2G1 1151 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 CLDN16Q9Y5I7 305 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 PIAS3Q9Y6X2 628 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 RUSC2Q8N2Y8 1516 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 TGFB1I1O43294 461 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 TIMM44O43615 452 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 ACADMP11310 421 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 GPD1P21695 349 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 PROZP22891 400 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 ABCD1P33897 745 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 BSGP35613 385 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 HARS2P49590 506 aaKnown RBP4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 ARF3P61204 181 aaPredicted RBP4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 ARF1P84077 181 aaKnown RBP4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 EFNB1P98172 346 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 RPE65Q16518 533 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 PLK5Q496M5 336 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 SLC9B1Q4ZJI4 515 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 C10orf76Q5T2E6 689 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 RBM44Q6ZP01 1051 aaKnown RBP4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 PXKQ7Z7A4 578 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 CHSY1Q86X52 802 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 KLBQ86Z14 1044 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 C16orf71Q8IYS4 520 aaPredicted RBP4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 PLD5Q8N7P1 536 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 SCAIQ8N9R8 606 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 FAM47BQ8NA70 645 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 KCNG4Q8TDN1 519 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 NEU4Q8WWR8 484 aaPredicted RBP4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 CUL5Q93034 780 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 KIF1BPQ96EK5 621 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 SAAL1Q96ER3 474 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 TIGD1Q96MW7 591 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 FRG2BQ96QU4 278 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 FCRL5Q96RD9 977 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 MPHOSPH8Q99549 860 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 TM2D2Q9BX73 214 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 ITPAQ9BY32 194 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 RANBP17Q9H2T7 1088 aaKnown RBP4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 GHITMQ9H3K2 345 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 MLXIPLQ9NP71 852 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 IL17RBQ9NRM6 502 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 DIAPH3Q9NSV4 1193 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 GPR34Q9UPC5 381 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 RABGAP1Q9Y3P9 1069 aa4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 FNDC1Q4ZHG4 1894 aaPredicted RBP4.04□□□□□ -1.76
RNU6-28P-201ENST00000362378 A0A087X1B8 175 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 TCRBV7S3A2A0A539 114 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 OR6C68A6NDL8 312 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 TIPRLO75663 272 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 CCNDBP1O95273 360 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 MLYCDO95822 493 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 FCGR2AP12318 317 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 TACR3P29371 465 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 MAPK4P31152 587 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 EIF3BP55884 814 aaKnown RBP4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 KRTAP10-2P60368 255 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 RPS3AP61247 264 aaKnown RBP4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 RPL7AP62424 266 aaKnown RBP4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 MAMLD1Q13495 774 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 DCTN2Q13561 401 aaKnown RBP4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 PROSER3Q2NL68 480 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 CERKLQ49MI3 558 aaPredicted RBP4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 ZNF667Q5HYK9 610 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 ZNF362Q5T0B9 420 aaPredicted RBP4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 AKNAD1Q5T1N1 836 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 TTLL5Q6EMB2 1281 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 TMEM81Q6P7N7 255 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 RRM2BQ7LG56 351 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 AMIGO2Q86SJ2 522 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 CPXM2Q8N436 756 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 C11orf65Q8NCR3 313 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 HSPH1Q92598 858 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 SDF4Q9BRK5 362 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 FRMD8Q9BZ67 464 aaPredicted RBP4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 KLK15Q9H2R5 256 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 MUC13Q9H3R2 512 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 SEMA4GQ9NTN9 838 aa4.03□□□□□ -1.76
RNU6-28P-201ENST00000362378 ASB6Q9NWX5 421 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms