RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 GPRIN1Q7Z2K8 1008 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 SMOQ99835 787 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 KLHL25Q9H0H3 589 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 HBS1LQ9Y450 684 aaKnown RBP9.37□□□□□ -0.91
CALD1-202ENST00000361901 WFS1O76024 890 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 CLPTM1O96005 669 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 F9P00740 461 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 HSPA8P11142 646 aaKnown RBP9.37□□□□□ -0.91
CALD1-202ENST00000361901 KRT4P19013 534 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 WARSP23381 471 aaKnown RBP9.37□□□□□ -0.91
CALD1-202ENST00000361901 ARHGAP17Q68EM7 881 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 OLIG1Q8TAK6 271 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 SCYL1Q96KG9 808 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 PPP1R10Q96QC0 940 aaKnown RBP9.37□□□□□ -0.91
CALD1-202ENST00000361901 VRTNQ9H8Y1 702 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 PIGVQ9NUD9 493 aa9.37□□□□□ -0.91
CALD1-202ENST00000361901 IQANK1A0A1B0GTG1 560 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 TCRBV7S3A2A0A539 114 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 CBX6O95503 412 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 GSTT2P0CG29 244 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 GSTT2BP0CG30 244 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 CCR1P32246 355 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 DRG2P55039 364 aaKnown RBP9.36□□□□□ -0.91
CALD1-202ENST00000361901 VARS2Q5ST30 1063 aaKnown RBP9.36□□□□□ -0.91
CALD1-202ENST00000361901 C1orf146Q5VVC0 180 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 IL31Q6EBC2 164 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 RBM44Q6ZP01 1051 aaKnown RBP9.36□□□□□ -0.91
CALD1-202ENST00000361901 MREGQ8N565 214 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 ARFGAP1Q8N6T3 406 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 COQ7Q99807 217 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 ARHGEF3Q9NR81 526 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 ZDHHC18Q9NUE0 388 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 GDAP2Q9NXN4 497 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 GPC6Q9Y625 555 aaPredicted RBP9.36□□□□□ -0.91
CALD1-202ENST00000361901 A0A1W2PQH9 124 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 EIF3FO00303 357 aaPredicted RBP9.36□□□□□ -0.91
CALD1-202ENST00000361901 COPEO14579 308 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 TSPAN3O60637 253 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 LPXNO60711 386 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 KRT37O76014 449 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 ITGAVP06756 1048 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 CREB1P16220 341 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 MX2P20592 715 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 YWHAQP27348 245 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 PSMB4P28070 264 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 ADRA1BP35368 520 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 SLC12A2P55011 1212 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 IKBKEQ14164 716 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 EFTUD2Q15029 972 aaKnown RBP eCLIP9.36□□□□□ -0.91
CALD1-202ENST00000361901 PKN2Q16513 984 aaKnown RBP9.36□□□□□ -0.91
CALD1-202ENST00000361901 KLHL38Q2WGJ6 581 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 ZNF669Q96BR6 464 aaPredicted RBP9.36□□□□□ -0.91
CALD1-202ENST00000361901 THAP11Q96EK4 314 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 N6AMT1Q9Y5N5 214 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.36□□□□□ -0.91
CALD1-202ENST00000361901 SCN1AP35498 2009 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 A0A0G2JND7 137 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 MFSD11O43934 449 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 CBFA2T3O75081 653 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 PEX11AO75192 247 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 PFKMP08237 780 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 KITP10721 976 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 CDH5P33151 784 aaPredicted RBP9.36□□□□□ -0.91
CALD1-202ENST00000361901 PGM1P36871 562 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 ALDH1A3P47895 512 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 DAOAP59103 153 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 LSAMPQ13449 338 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 VEPH1Q14D04 833 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 RGS9BPQ6ZS82 235 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 FITM2Q8N6M3 262 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 UBR7Q8N806 425 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 SCAIQ8N9R8 606 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 OR6P1Q8NGX9 317 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 AUTS2Q8WXX7 1259 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 ATP2A3Q93084 1043 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 ZNF333Q96JL9 665 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 TUBGCP5Q96RT8 1024 aa9.36□□□□□ -0.91
CALD1-202ENST00000361901 TGM2P21980 687 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 TBX4P57082 545 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 AUHQ13825 339 aaKnown RBP9.35□□□□□ -0.91
CALD1-202ENST00000361901 ZBTB6Q15916 424 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 UPP1Q16831 310 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 OR52E8Q6IFG1 317 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 TMC7Q7Z402 723 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 ZCCHC9Q8N567 271 aaKnown RBP9.35□□□□□ -0.91
CALD1-202ENST00000361901 CMASQ8NFW8 434 aaPredicted RBP9.35□□□□□ -0.91
CALD1-202ENST00000361901 PAFAH2Q99487 392 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 ADAM28Q9UKQ2 775 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 DRG1Q9Y295 367 aaKnown RBP9.35□□□□□ -0.91
CALD1-202ENST00000361901 EFR3BQ9Y2G0 817 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.35□□□□□ -0.91
CALD1-202ENST00000361901 C9IYK1 514 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 TRIM49D1C9J1S8 452 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 MATN2O00339 956 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 TSPAN9O75954 239 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 CDK7P50613 346 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 POU5F1Q01860 360 aaKnown RBP9.35□□□□□ -0.91
CALD1-202ENST00000361901 SIX1Q15475 284 aaPredicted RBP9.35□□□□□ -0.91
CALD1-202ENST00000361901 GSTA3Q16772 222 aa9.35□□□□□ -0.91
CALD1-202ENST00000361901 FNBP1LQ5T0N5 605 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms