RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 PRRG4Q9BZD6 226 aa20.6■□□□□ 0.89
CDC42BPB-201ENST00000361246 FAM105AQ9NUU6 356 aa20.6■□□□□ 0.89
CDC42BPB-201ENST00000361246 MAT2BQ9NZL9 334 aa20.6■□□□□ 0.89
CDC42BPB-201ENST00000361246 KRT6AP02538 564 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 KRT6BP04259 564 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 ASGR1P07306 291 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 KRT6CP48668 564 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 DEFB119Q8N690 84 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 ATP6V1C2Q8NEY4 427 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 OR14C36Q8NHC7 312 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 RNASE11Q8TAA1 199 aaKnown RBP20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 ACO2Q99798 780 aaKnown RBP20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 WRAP53Q9BUR4 548 aaKnown RBP20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 REXO4Q9GZR2 422 aaKnown RBP20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 OPTCQ9UBM4 332 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 HS6ST1O60243 411 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 BMP10O95393 424 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 COX7A2P14406 83 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 PCYT1AP49585 367 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 REXO1L1PQ8IX06 675 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 KLHL28Q9NXS3 571 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 TMEM114B3SHH9 223 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 RNASEH2AO75792 299 aaKnown RBP20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 PIAS1O75925 651 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 MGAT5Q09328 741 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 ZC3H7AQ8IWR0 971 aaKnown RBP20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 RIBC1Q8N443 379 aaPredicted RBP20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 UROC1Q96N76 676 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 CCDC134Q9H6E4 229 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 OR10H1Q9Y4A9 318 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 BIKQ13323 160 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 ATP13A3Q9H7F0 1226 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 TRMT13Q9NUP7 481 aaKnown RBP20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 SALL1Q9NSC2 1324 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 TRUB2O95900 331 aaKnown RBP20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 IL5RAQ01344 420 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 FAM20CQ8IXL6 584 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 ZSCAN18Q8TBC5 510 aaPredicted RBP20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 SCLYQ96I15 445 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 PALMDQ9NP74 551 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 CCDC167Q9P0B6 97 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 WHRNQ9P202 907 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 BLOC1S6Q9UL45 172 aa20.59■□□□□ 0.89
CDC42BPB-201ENST00000361246 A0A087X0B3 334 aa20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 PLSCR1O15162 318 aa20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 HNRNPRO43390 633 aaKnown RBP20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 MPOP05164 745 aa20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 GRTP1Q5TC63 336 aa20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 MTDHQ86UE4 582 aaKnown RBP20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 SMG7Q92540 1137 aaKnown RBP20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 TAS2R14Q9NYV8 317 aa20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 SIRPGQ9P1W8 387 aa20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 NCAM2O15394 837 aa20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 NPY2RP49146 381 aa20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 KIDINS220Q9ULH0 1771 aa20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 HTR1BP28222 390 aa20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 CYP2A13Q16696 494 aa20.58■□□□□ 0.89
CDC42BPB-201ENST00000361246 ADRB2P07550 413 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 RPL17P18621 184 aaKnown RBP20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 CRYBB1P53674 252 aaPredicted RBP20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 AGMOQ6ZNB7 445 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 TNKS2Q9H2K2 1166 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 TSC22D2O75157 780 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 INHAP05111 366 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 CAPSQ13938 189 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 ZNF268Q14587 947 aaPredicted RBP20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 FAM129CQ86XR2 697 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 SLC22A9Q8IVM8 553 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 SCAIQ8N9R8 606 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 NCKIPSDQ9NZQ3 722 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 ARHGAP20Q9P2F6 1191 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 FAM25AB3EWG3 89 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 FAM25CB3EWG5 89 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 FAM25GB3EWG6 89 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 PIK3CDO00329 1044 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 PRKCZQ05513 592 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 C1QBPQ07021 282 aaKnown RBP20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 ZFP14Q9HCL3 533 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 COQ6Q9Y2Z9 468 aa20.58■□□□□ 0.88
CDC42BPB-201ENST00000361246 AXIN1O15169 862 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 EIF3HO15372 352 aaKnown RBP eCLIP20.57■□□□□ 0.881e-6■■□□□ 14.1
CDC42BPB-201ENST00000361246 VAV1P15498 845 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 PANX3Q96QZ0 392 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 RAD54BQ9Y620 910 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 CNTNAP1P78357 1384 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 UBDO15205 165 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 ANKS1BQ7Z6G8 1248 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 RNPEPQ9H4A4 650 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 CACNG4Q9UBN1 327 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 LIMD1Q9UGP4 676 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 CSH1P0DML2 217 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 CSH2P0DML3 217 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 PSMA3P25788 255 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 HPCAL1P37235 193 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 CYP4F2P78329 520 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 RCN1Q15293 331 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 CARD9Q9H257 536 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 TLR5O60602 858 aa20.57■□□□□ 0.88
CDC42BPB-201ENST00000361246 SLC25A14O95258 325 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms