RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 MFSD1Q9H3U5 465 aa18.32■□□□□ 0.52
CLK2-202ENST00000361168 C11orf16Q9NQ32 467 aa18.32■□□□□ 0.52
CLK2-202ENST00000361168 CACNA2D2Q9NY47 1150 aa18.32■□□□□ 0.52
CLK2-202ENST00000361168 SMARCAL1Q9NZC9 954 aa18.32■□□□□ 0.52
CLK2-202ENST00000361168 ZMPSTE24O75844 475 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 PAFAH1B3Q15102 231 aaKnown RBP18.31■□□□□ 0.52
CLK2-202ENST00000361168 ZNF354CQ86Y25 554 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.31■□□□□ 0.52
CLK2-202ENST00000361168 COG1Q8WTW3 980 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 MSANTD3Q96H12 275 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 MS4A14Q96JA4 679 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 MRGPRX3Q96LB0 322 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 MAK16Q9BXY0 300 aaKnown RBP18.31■□□□□ 0.52
CLK2-202ENST00000361168 CHD5Q8TDI0 1954 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 NYNRINQ9P2P1 1898 aaKnown RBP18.31■□□□□ 0.52
CLK2-202ENST00000361168 APOL1O14791 398 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 ZNF185O15231 689 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 SMAD6O43541 496 aaKnown RBP18.31■□□□□ 0.52
CLK2-202ENST00000361168 POLR2EP19388 210 aaKnown RBP18.31■□□□□ 0.52
CLK2-202ENST00000361168 PLK1P53350 603 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 NYAP1Q6ZVC0 841 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 ALLCQ8N6M5 410 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 ZNF513Q8N8E2 541 aaPredicted RBP18.31■□□□□ 0.52
CLK2-202ENST00000361168 RPLP0P6Q8NHW5 317 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 TTC17Q96AE7 1141 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 MAGEH1Q9H213 219 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 C10orf88Q9H8K7 445 aa18.31■□□□□ 0.52
CLK2-202ENST00000361168 HLA-EP13747 358 aa18.3■□□□□ 0.52
CLK2-202ENST00000361168 VAV1P15498 845 aa18.3■□□□□ 0.52
CLK2-202ENST00000361168 NDST2P52849 883 aa18.3■□□□□ 0.52
CLK2-202ENST00000361168 SERINC3Q13530 473 aa18.3■□□□□ 0.52
CLK2-202ENST00000361168 ZNF234Q14588 700 aa18.3■□□□□ 0.52
CLK2-202ENST00000361168 PPP2R5EQ16537 467 aa18.3■□□□□ 0.52
CLK2-202ENST00000361168 VSIG1Q86XK7 387 aa18.3■□□□□ 0.52
CLK2-202ENST00000361168 IL17RCQ8NAC3 791 aa18.3■□□□□ 0.52
CLK2-202ENST00000361168 ZNF419Q96HQ0 510 aaPredicted RBP18.3■□□□□ 0.52
CLK2-202ENST00000361168 LGMNQ99538 433 aa18.3■□□□□ 0.52
CLK2-202ENST00000361168 STARD13Q9Y3M8 1113 aa18.3■□□□□ 0.52
CLK2-202ENST00000361168 SIT1Q9Y3P8 196 aa18.3■□□□□ 0.52
CLK2-202ENST00000361168 ZNF487B1APH4 448 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 IL12RB1P42701 662 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 TNFRSF4P43489 277 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 ECT2LQ008S8 904 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 KLF1Q13351 362 aaPredicted RBP18.29■□□□□ 0.52
CLK2-202ENST00000361168 SLC12A1Q13621 1099 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 DGKKQ5KSL6 1271 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 SYT10Q6XYQ8 523 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 CARD9Q9H257 536 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 R3HDM2Q9Y2K5 976 aaKnown RBP18.29■□□□□ 0.52
CLK2-202ENST00000361168 TTC34A8MYJ7 566 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 SGK1O00141 431 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 MAFKO60675 156 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 ADAM23O75077 832 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 DLDP09622 509 aaKnown RBP18.29■□□□□ 0.52
CLK2-202ENST00000361168 HNRNPLP14866 589 aaKnown RBP eCLIP18.29■□□□□ 0.524e-7■■□□□ 13
CLK2-202ENST00000361168 YBEYP58557 167 aaPredicted RBP18.29■□□□□ 0.52
CLK2-202ENST00000361168 PARP15Q460N3 678 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 ZNF783Q6ZMS7 281 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 BBS12Q6ZW61 710 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 CHPFQ8IZ52 775 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 DCAF4L2Q8NA75 395 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 TXNDC5Q8NBS9 432 aaKnown RBP18.29■□□□□ 0.52
CLK2-202ENST00000361168 USP33Q8TEY7 942 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 PBXIP1Q96AQ6 731 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 DLGAP2Q9P1A6 1054 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 ERVW-1Q9UQF0 538 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 RAD54BQ9Y620 910 aa18.29■□□□□ 0.52
CLK2-202ENST00000361168 PRKCHP24723 683 aa18.28■□□□□ 0.52
CLK2-202ENST00000361168 COPS2P61201 443 aa18.28■□□□□ 0.52
CLK2-202ENST00000361168 ETF1P62495 437 aaKnown RBP18.28■□□□□ 0.52
CLK2-202ENST00000361168 SUGP1Q8IWZ8 645 aaKnown RBP18.28■□□□□ 0.52
CLK2-202ENST00000361168 ZNF557Q8N988 423 aaPredicted RBP18.28■□□□□ 0.52
CLK2-202ENST00000361168 WFIKKN2Q8TEU8 576 aa18.28■□□□□ 0.52
CLK2-202ENST00000361168 OSBPL9Q96SU4 736 aa18.28■□□□□ 0.52
CLK2-202ENST00000361168 C2orf49Q9BVC5 232 aaPredicted RBP18.28■□□□□ 0.52
CLK2-202ENST00000361168 RETREG1Q9H6L5 497 aa18.28■□□□□ 0.52
CLK2-202ENST00000361168 PDFQ9HBH1 243 aa18.28■□□□□ 0.52
CLK2-202ENST00000361168 IPO11Q9UI26 975 aaKnown RBP18.28■□□□□ 0.52
CLK2-202ENST00000361168 SNX12Q9UMY4 172 aa18.28■□□□□ 0.52
CLK2-202ENST00000361168 MRPS17Q9Y2R5 130 aaKnown RBP18.28■□□□□ 0.52
CLK2-202ENST00000361168 FCF1Q9Y324 198 aaKnown RBP18.28■□□□□ 0.52
CLK2-202ENST00000361168 KDELR3O43731 214 aa18.27■□□□□ 0.52
CLK2-202ENST00000361168 CEP104O60308 925 aa18.27■□□□□ 0.52
CLK2-202ENST00000361168 PTPN7P35236 360 aa18.27■□□□□ 0.52
CLK2-202ENST00000361168 NRLP54845 237 aa18.27■□□□□ 0.52
CLK2-202ENST00000361168 OXCT1P55809 520 aa18.27■□□□□ 0.52
CLK2-202ENST00000361168 GALNT2Q10471 571 aa18.27■□□□□ 0.52
CLK2-202ENST00000361168 EIF4HQ15056 248 aaKnown RBP18.27■□□□□ 0.52
CLK2-202ENST00000361168 ZC3H18Q86VM9 953 aaKnown RBP18.27■□□□□ 0.52
CLK2-202ENST00000361168 LZTR1Q8N653 840 aa18.27■□□□□ 0.52
CLK2-202ENST00000361168 ACTL9Q8TC94 416 aa18.27■□□□□ 0.52
CLK2-202ENST00000361168 OLFM3Q96PB7 478 aa18.27■□□□□ 0.52
CLK2-202ENST00000361168 THAP10Q9P2Z0 257 aaPredicted RBP18.27■□□□□ 0.52
CLK2-202ENST00000361168 PLA2G4CQ9UP65 541 aa18.27■□□□□ 0.52
CLK2-202ENST00000361168 ZNF821O75541 412 aaPredicted RBP18.27■□□□□ 0.51
CLK2-202ENST00000361168 GJB3O75712 270 aa18.27■□□□□ 0.51
CLK2-202ENST00000361168 KLF8O95600 359 aaPredicted RBP18.27■□□□□ 0.51
CLK2-202ENST00000361168 PEX11BO96011 259 aa18.27■□□□□ 0.51
CLK2-202ENST00000361168 FGGP02679 453 aa18.27■□□□□ 0.51
CLK2-202ENST00000361168 ATP5BP06576 529 aaKnown RBP18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms